RNA–Protein interactions for RNA: ENST00000550611.1

LIMA1-206, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-206ENST00000550611 CXorf21Q9HAI6 301 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 TRIM36Q9NQ86 728 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 PLSCR4Q9NRQ2 329 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 TEX10Q9NXF1 929 aaPredicted RBP3.15□□□□□ -1.91
LIMA1-206ENST00000550611 MS4A12Q9NXJ0 267 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 NDUFAF4Q9P032 175 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 ZNF639Q9UID6 485 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 PTBP2Q9UKA9 531 aaKnown RBP3.15□□□□□ -1.91
LIMA1-206ENST00000550611 BAG5Q9UL15 447 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 CORO1CQ9ULV4 474 aaPredicted RBP3.15□□□□□ -1.91
LIMA1-206ENST00000550611 NFU1Q9UMS0 254 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 ERVK-19Q9WJR5 959 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 ASB4Q9Y574 426 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 SACSQ9NZJ4 4579 aa3.15□□□□□ -1.91
LIMA1-206ENST00000550611 A0A0A6YYD5 115 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 AGAP5A6NIR3 686 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 GOLGA8MH3BSY2 632 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PLPP1O14494 284 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PGRMC2O15173 223 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TO15178 435 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 DHHO43323 396 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 NDUFS7O75251 213 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 UGT2B11O75310 529 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 EEDO75530 441 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PRKRAO75569 313 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 STK16O75716 305 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 IPO7O95373 1038 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TTC4O95801 387 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 IGKV3-20P01619 116 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 CD8AP01732 235 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 FGGP02679 453 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 SOD3P08294 240 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 POU2F1P14859 743 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PGAM1P18669 254 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TNFRSF1BP20333 461 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 DRD5P21918 477 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 GPX3P22352 226 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 SRD5A2P31213 254 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 GRK5P34947 590 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 BSGP35613 385 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 ACVR1BP36896 505 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 VPS41P49754 854 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TMED10P49755 219 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 DIO1P49895 249 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 SUCLG1P53597 346 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TERF1P54274 439 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 GAS1P54826 345 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TAS2R39P59534 338 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 RPS13P62277 151 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 RPS4XP62701 263 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 RPP38P78345 283 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PSG6Q00889 435 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 HMGCS1Q01581 520 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TNFRSF17Q02223 184 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 VEZF1Q14119 521 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 FRG1Q14331 258 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TOMM20Q15388 145 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TGFBIQ15582 683 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TSNQ15631 228 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 AP5B1Q2VPB7 878 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PGGHGQ32M88 737 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PAGE2BQ5JRK9 111 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 SPANXN3Q5MJ09 141 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 C6orf52Q5T4I8 152 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 RNASEH2BQ5TBB1 312 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 KHDRBS2Q5VWX1 349 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 FAM90A2PQ658T7 463 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 OR2A2Q6IF42 318 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 AAGABQ6PD74 315 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 C16orf89Q6UX73 402 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 STAC2Q6ZMT1 411 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PLCZ1Q86YW0 608 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 GRAMD2AQ8IUY3 354 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 PRR22Q8IZ63 422 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 RNF175Q8N4F7 328 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 OR7G3Q8NG95 312 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 OR7G1Q8NGA0 311 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 OSR1Q8TAX0 266 aaPredicted RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 RAB3IL1Q8TBN0 382 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 MAIP1Q8WWC4 291 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 FIG4Q92562 907 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 AKAP1Q92667 903 aaKnown RBP eCLIP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 ESAMQ96AP7 390 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 C11orf24Q96F05 449 aaPredicted RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 ZBED6CLQ96FA7 236 aaPredicted RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 TRMT61AQ96FX7 289 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 CMTM7Q96FZ5 175 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 CERS2Q96G23 380 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 MAELQ96JY0 434 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 FAM111AQ96PZ2 611 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 GAL3ST4Q96RP7 486 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 EGFL8Q99944 293 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 OSBPL11Q9BXB4 747 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 DERL2Q9GZP9 239 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 NXF5Q9H1B4 397 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 OR10A4Q9H209 315 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 OR51B5Q9H339 312 aa3.14□□□□□ -1.91
LIMA1-206ENST00000550611 ESRP2Q9H6T0 727 aaKnown RBP3.14□□□□□ -1.91
LIMA1-206ENST00000550611 DDX31Q9H8H2 851 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms