RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 BTNL2Q9UIR0 455 aa5.95□□□□□ -1.46
SCAF11-211ENST00000547950 ING1Q9UK53 422 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-211ENST00000547950 RAB21Q9UL25 225 aa5.95□□□□□ -1.46
SCAF11-211ENST00000547950 LAMP3Q9UQV4 416 aa5.95□□□□□ -1.46
SCAF11-211ENST00000547950 C2CD3Q4AC94 2353 aa5.95□□□□□ -1.46
SCAF11-211ENST00000547950 PRAMEF27A3QJZ7 478 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 POM121CA8CG34 1229 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 E9PBE3 544 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 SMAD9O15198 467 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 KIAA0513O60268 411 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF500O60304 480 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CYTIPO60759 359 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 DNAJA2O60884 412 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 LYZL6O75951 148 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CNOT4O95628 575 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 IGHV3-9P01782 118 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 FESP07332 822 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CD3EP07766 207 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ALDOCP09972 364 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 FREM3P0C091 2139 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 EDNRAP25101 427 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 EPHA3P29320 983 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 IL12AP29459 219 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 APOBEC1P41238 236 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CDKN2CP42773 168 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 OR3A2P47893 321 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ATP5J2P56134 94 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 OR2B6P58173 313 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CSNK2A1P68400 391 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 HPCAP84074 193 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ITGADQ13349 1161 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 TAB1Q15750 504 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 SYPL1Q16563 259 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 SYT14P1Q58G82 188 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 TNFAIP8L3Q5GJ75 292 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 SAXO2Q658L1 398 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 NXNQ6DKJ4 435 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 C3orf33Q6P1S2 294 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 PRSS57Q6UWY2 283 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 FRRS1Q6ZNA5 592 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 TMPPEQ6ZT21 453 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 BHLHA15Q7RTS1 189 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 SPATA19Q7Z5L4 167 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 GALNT5Q7Z7M9 940 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CROCCP2Q86T23 111 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ATG4DQ86TL0 474 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 MTDHQ86UE4 582 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 LSRQ86X29 649 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ADGRG3Q86Y34 549 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 KIRREL3Q8IZU9 778 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 UBE2J2Q8N2K1 259 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 TRIML2Q8N7C3 387 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF611Q8N823 705 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ANKFN1Q8N957 763 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 LILRB1Q8NHL6 650 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 PNPT1Q8TCS8 783 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CNOT9Q92600 299 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF75CPQ92670 426 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 NEUROG1Q92886 237 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 NEURL3Q96EH8 262 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 HSH2DQ96JZ2 352 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CCDC115Q96NT0 180 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 PSD2Q9BQI7 771 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 TMEM204Q9BSN7 226 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 GSX2Q9BZM3 304 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 OR11A1Q9GZK7 315 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 CXorf56Q9H5V9 222 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 ESRP2Q9H6T0 727 aaKnown RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 MTHFD2LQ9H903 347 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-211ENST00000547950 BCO1Q9HAY6 547 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 POLE3Q9NRF9 147 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 AIG1Q9NVV5 245 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 THAP1Q9NVV9 213 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 HAO1Q9UJM8 370 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 SLC35A3Q9Y2D2 325 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 RNF115Q9Y4L5 304 aa5.94□□□□□ -1.46
SCAF11-211ENST00000547950 NIPBLQ6KC79 2804 aaeCLIP5.94□□□□□ -1.466e-8■■■□□ 16.3
SCAF11-211ENST00000547950 TMED7-TICAM2A0A0A6YYA0 188 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 CIB4A0PJX0 185 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 TMEM120BA0PK00 339 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 DPRXA6NFQ7 191 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 CCT8L1PA6NM43 557 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 TRPC5OSA6NMA1 111 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ZNF724A8MTY0 619 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 FAM171A2A8MVW0 826 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 FAM229AH3BQW9 127 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 M0R082 166 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ETV2O00321 342 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-211ENST00000547950 HMGN4O00479 90 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 SDHDO14521 159 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 AP3D1O14617 1153 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 HDAC3O15379 428 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 ADAM11O75078 769 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 SLC22A3O75751 556 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 PGRP06401 933 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 CHRM4P08173 479 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 GUSBP08236 651 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 NR2F1P10589 423 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 IL7RP16871 459 aa5.93□□□□□ -1.46
SCAF11-211ENST00000547950 BSPH1Q075Z2 132 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms