RNA–Protein interactions for RNA: ENST00000546869.1

DDX54-203, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-203ENST00000546869 DNPH1O43598 174 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 TGM6O95932 706 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 OPN1SWP03999 348 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 CXCR1P25024 350 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 CTSSP25774 331 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 SHC1P29353 583 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 SFTPDP35247 375 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 OPRM1P35372 400 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 CPOXP36551 454 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 EIF1AXP47813 144 aaKnown RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 RGS8P57771 180 aaPredicted RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 SELENOWP63302 87 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 SLC25A3Q00325 362 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 PON3Q15166 354 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 SWT1Q5T5J6 900 aaKnown RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 ULK3Q6PHR2 472 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 POMZP3Q6PJE2 187 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 ATG4DQ86TL0 474 aaPredicted RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 RANBP3LQ86VV4 465 aaPredicted RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 ARHGAP24Q8N264 748 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 SMPDL3BQ92485 455 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 FIG4Q92562 907 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 C3orf49Q96BT1 292 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 DDIT4LQ96D03 193 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 ZNF845Q96IR2 970 aaPredicted RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 KCTD14Q9BQ13 255 aaPredicted RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 PCDHAC1Q9H158 963 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 TMEM185BQ9H7F4 350 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 COQ10BQ9H8M1 238 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 GLRX2Q9NS18 164 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 TMED7Q9Y3B3 224 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 MED12Q93074 2177 aa12.98□□□□□ -0.33
DDX54-203ENST00000546869 PHF3Q92576 2039 aaKnown RBP12.98□□□□□ -0.33
DDX54-203ENST00000546869 TMEM72A0PK05 275 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 B2RBV5 119 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 CXCR6O00574 342 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 FRS3O43559 492 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 CXCL13O43927 109 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 TPST2O60704 377 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 NPIPB7O75200 414 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 SYNGR4O95473 234 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 PMS2P2O95744 297 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 OPN1LWP04000 364 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 PNMTP11086 282 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 GGT1P19440 569 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 HTR2AP28223 471 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 SLC7A1P30825 629 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 CSNK2A1P68400 391 aaPredicted RBP12.97□□□□□ -0.33
DDX54-203ENST00000546869 SLC25A35Q3KQZ1 300 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 SAMD4BQ5PRF9 694 aaKnown RBP12.97□□□□□ -0.33
DDX54-203ENST00000546869 GTF2IRD2BQ6EKJ0 949 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 ZNF613Q6PF04 617 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 GTF2IRD2Q86UP8 949 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 CCDC71Q8IV32 467 aaPredicted RBP12.97□□□□□ -0.33
DDX54-203ENST00000546869 CADM2Q8N3J6 435 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 NAXEQ8NCW5 288 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 OR52E4Q8NGH9 312 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 FNDC9Q8TBE3 224 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 CA5BP1Q8WTZ4 195 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 PROX1Q92786 737 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 CDRT15Q96T59 188 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 WFDC6Q9BQY6 131 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 SFXN3Q9BWM7 321 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 POLR2J2Q9GZM3 115 aaKnown RBP12.97□□□□□ -0.33
DDX54-203ENST00000546869 POLR2J3Q9H1A7 115 aaKnown RBP12.97□□□□□ -0.33
DDX54-203ENST00000546869 GORASP2Q9H8Y8 452 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 TMEM27Q9HBJ8 222 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 GP6Q9HCN6 339 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 ADA2Q9NZK5 511 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 RPS6KB2Q9UBS0 482 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 SLC9A8Q9Y2E8 581 aa12.97□□□□□ -0.33
DDX54-203ENST00000546869 A0A0B4J2E0 115 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 A0A1B0GX12 115 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 A8MVM7 634 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 DVL2O14641 736 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 GSTA4O15217 222 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 TMIGD3P0DMS9 266 aaPredicted RBP12.96□□□□□ -0.33
DDX54-203ENST00000546869 DIO1P49895 249 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 AGFG1P52594 562 aaKnown RBP12.96□□□□□ -0.33
DDX54-203ENST00000546869 HOXC5Q00444 222 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 GUSBP1Q15486 140 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 OR1Q1Q15612 314 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 ZNF239Q16600 458 aaKnown RBP12.96□□□□□ -0.33
DDX54-203ENST00000546869 CYBRD1Q53TN4 286 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 C5orf46Q6UWT4 87 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 CBLL1Q75N03 491 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 MAMDC2Q7Z304 686 aaPredicted RBP12.96□□□□□ -0.33
DDX54-203ENST00000546869 P4HA3Q7Z4N8 544 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 DEFB107AQ8IZN7 70 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 SLC43A2Q8N370 569 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 RBM15BQ8NDT2 890 aaKnown RBP12.96□□□□□ -0.33
DDX54-203ENST00000546869 ATP6V1C2Q8NEY4 427 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 OR6T1Q8NGN1 323 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 STK35Q8TDR2 534 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 LZICQ8WZA0 190 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 SLC38A4Q969I6 547 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 SLC47A1Q96FL8 570 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 GMPPAQ96IJ6 420 aaPredicted RBP12.96□□□□□ -0.33
DDX54-203ENST00000546869 OR5B2Q96R09 309 aa12.96□□□□□ -0.33
DDX54-203ENST00000546869 ADPRHL2Q9NX46 363 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms