RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 NCF2P19878 526 aaPredicted RBP20.72■□□□□ 0.91
CHFR-222ENST00000544093 CRYGSP22914 178 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 COPZ1P61923 177 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 RASGEF1BQ0VAM2 473 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 SPNS3Q6ZMD2 512 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 MTDHQ86UE4 582 aaKnown RBP20.72■□□□□ 0.91
CHFR-222ENST00000544093 ADGRG3Q86Y34 549 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 BBS10Q8TAM1 723 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 SLC35B4Q969S0 331 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 DDIT4LQ96D03 193 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 HDHD5Q9BXW7 423 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 C12orf49Q9H741 205 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 NPHS2Q9NP85 383 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 SLC52A3Q9NQ40 469 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 EMC3Q9P0I2 261 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 TRAPPC4Q9Y296 219 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 ZNF443Q9Y2A4 671 aaPredicted RBP20.72■□□□□ 0.91
CHFR-222ENST00000544093 GPR52Q9Y2T5 361 aa20.72■□□□□ 0.91
CHFR-222ENST00000544093 ZNF724A8MTY0 619 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 AP3D1O14617 1153 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 SMAD9O15198 467 aaKnown RBP20.71■□□□□ 0.91
CHFR-222ENST00000544093 ADAM11O75078 769 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 CD1EP15812 388 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 PSMB1P20618 241 aaKnown RBP20.71■□□□□ 0.91
CHFR-222ENST00000544093 DNASE1P24855 282 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 PDK3Q15120 406 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 TESK1Q15569 626 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 TFAP2EQ6VUC0 442 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 STAC2Q6ZMT1 411 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 ZNF836Q6ZNA1 936 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 TSPEARQ8WU66 669 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 USB1Q9BQ65 265 aaKnown RBP20.71■□□□□ 0.91
CHFR-222ENST00000544093 PSD2Q9BQI7 771 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 SPATA9Q9BWV2 254 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 SLC25A37Q9NYZ2 338 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 DCTN4Q9UJW0 460 aa20.71■□□□□ 0.91
CHFR-222ENST00000544093 TMED7-TICAM2A0A0A6YYA0 188 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 EVPLLA8MZ36 301 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 FESP07332 822 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 ETS2P15036 469 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 GCNT6Q5T4J0 391 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 PAMR1Q6UXH9 720 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 VRK2Q86Y07 508 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 NRGNQ92686 78 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 RLIMQ9NVW2 624 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 VAPAQ9P0L0 249 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 TMEM181Q9P2C4 612 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 LEF1Q9UJU2 399 aaPredicted RBP20.7■□□□□ 0.9
CHFR-222ENST00000544093 OSGIN1Q9UJX0 560 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 TMED7Q9Y3B3 224 aa20.7■□□□□ 0.9
CHFR-222ENST00000544093 IGHV3-15A0A0B4J1V0 119 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 A0A0G2JND7 137 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 EIF1BO60739 113 aaKnown RBP20.69■□□□□ 0.9
CHFR-222ENST00000544093 TACR3P29371 465 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 IST1P53990 364 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 P2RY6Q15077 328 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 HSP90B2PQ58FF3 399 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 ZNF311Q5JNZ3 666 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 PAGE3Q5JUK9 113 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 WBP2NLQ6ICG8 309 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 KRT73Q86Y46 540 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 MSRB3Q8IXL7 192 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 STEAP2Q8NFT2 490 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 PIGXQ8TBF5 258 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 FOXC2Q99958 501 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 SPATA5L1Q9BVQ7 753 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 ADAM19Q9H013 955 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 PLEKHF2Q9H8W4 249 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 NDUFAF1Q9Y375 327 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 AKAP9Q99996 3911 aa20.69■□□□□ 0.9
CHFR-222ENST00000544093 TRBV5-3A0A0A0MS03 114 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 GPR171O14626 319 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 ANGPT2O15123 496 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 PGM3O95394 542 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 CNOT4O95628 575 aaKnown RBP20.68■□□□□ 0.9
CHFR-222ENST00000544093 RAF1P04049 648 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 NUDT7P0C024 238 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 TROVE2P10155 538 aaKnown RBP eCLIP20.68■□□□□ 0.9
CHFR-222ENST00000544093 GPX2P18283 190 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 ART1P52961 327 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 SLC35A1P78382 337 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 RPS26P11Q5JNZ5 115 aaPredicted RBP20.68■□□□□ 0.9
CHFR-222ENST00000544093 ABLIM2Q6H8Q1 611 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 REEP3Q6NUK4 255 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 NUFIP2Q7Z417 695 aaKnown RBP20.68■□□□□ 0.9
CHFR-222ENST00000544093 GALNT5Q7Z7M9 940 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 GABRG1Q8N1C3 465 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 MAL2Q969L2 176 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 THOC1Q96FV9 657 aaKnown RBP20.68■□□□□ 0.9
CHFR-222ENST00000544093 ZNF385DQ9H6B1 395 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 TMEM38AQ9H6F2 299 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 SLAMF8Q9P0V8 285 aa20.68■□□□□ 0.9
CHFR-222ENST00000544093 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.68■□□□□ 0.9
CHFR-222ENST00000544093 IGKV3D-15A0A087WSY6 115 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 ARAFP10398 606 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 CXCR1P25024 350 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 ACAA2P42765 397 aaKnown RBP20.67■□□□□ 0.9
CHFR-222ENST00000544093 OR3A2P47893 321 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 CDK6Q00534 326 aa20.67■□□□□ 0.9
CHFR-222ENST00000544093 POU4F3Q15319 338 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms