RNA–Protein interactions for RNA: ENST00000543364.1

RAB35-205, Transcript of RAB35, member RAS oncogene family, human

TSL 3

Gene RAB35, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB35-205	ENST00000543364	PRR14	Q9BWN1	585 aa		13.65	□□□□□ -0.22
RAB35-205	ENST00000543364	ADAM19	Q9H013	955 aa		13.65	□□□□□ -0.22
RAB35-205	ENST00000543364	KAT8	Q9H7Z6	458 aa	Known RBP	13.65	□□□□□ -0.22
RAB35-205	ENST00000543364	CACYBP	Q9HB71	228 aa	Known RBP	13.65	□□□□□ -0.22
RAB35-205	ENST00000543364	CRIM1	Q9NZV1	1036 aa		13.65	□□□□□ -0.22
RAB35-205	ENST00000543364	MPDZ	O75970	2070 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	ZC3H12D	A2A288	527 aa	Known RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	FXYD1	O00168	92 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	DYNC1I1	O14576	645 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	MSTN	O14793	375 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	SS18L1	O75177	396 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	LSP1	P33241	339 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	KIR2DL3	P43628	341 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	DIO1	P49895	249 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	POLR2H	P52434	150 aa	Known RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	CTBP2	P56545	445 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	GNGT1	P63211	74 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	TLE4	Q04727	773 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	FAM27E3	Q08E93	113 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	MYBPH	Q13203	477 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	CYLC2	Q14093	348 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	MAPRE2	Q15555	327 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	ZNF550	Q7Z398	422 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	GDF7	Q7Z4P5	450 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	TREML1	Q86YW5	311 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	ZZZ3	Q8IYH5	903 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	HIPK4	Q8NE63	616 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	ZNF775	Q96BV0	537 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	RCN3	Q96D15	328 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	REXO5	Q96IC2	774 aa	Known RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	WFDC6	Q9BQY6	131 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	PROCR	Q9UNN8	238 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	USP22	Q9UPT9	525 aa		13.64	□□□□□ -0.23
RAB35-205	ENST00000543364	GMNC	A6NCL1	334 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	SULT2B1	O00204	365 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	SMAD9	O15198	467 aa	Known RBP	13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	PRKD3	O94806	890 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	FES	P07332	822 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	UQCRB	P14927	111 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	ADSL	P30566	484 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	PRKAR1B	P31321	381 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	CPOX	P36551	454 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	HTR3A	P46098	478 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	DMTN	Q08495	405 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	RBBP4	Q09028	425 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	BNIP2	Q12982	314 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	ZSWIM7	Q19AV6	140 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	EXOC3L2	Q2M3D2	409 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	DHRS4L2	Q6PKH6	230 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	NUFIP2	Q7Z417	695 aa	Known RBP	13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	NET1	Q7Z628	596 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	KRT73	Q86Y46	540 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	TUSC5	Q8IXB3	177 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	SMYD1	Q8NB12	490 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	C11orf65	Q8NCR3	313 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	RNF128	Q8TEB7	428 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	SLC25A43	Q8WUT9	341 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	C14orf79	Q96F83	325 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	ZNF607	Q96SK3	696 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	ZNF559	Q9BR84	538 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	ARMC7	Q9H6L4	198 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	C12orf49	Q9H741	205 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	MRGBP	Q9NV56	204 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	KCNN3	Q9UGI6	736 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	ING1	Q9UK53	422 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	EMC9	Q9Y3B6	208 aa		13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	SPIN1	Q9Y657	262 aa	Predicted RBP	13.63	□□□□□ -0.23
RAB35-205	ENST00000543364	BBIP1	A8MTZ0	92 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	ZNF814	B7Z6K7	855 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364		M0QX08	132 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	CCDC22	O60826	627 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	MFN2	O95140	757 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	OPN1SW	P03999	348 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	CD8B	P10966	210 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	IMPDH2	P12268	514 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	COX4I1	P13073	169 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	CXCR1	P25024	350 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	AGTR1	P30556	359 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	SSTR2	P30874	369 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	PCBP3	P57721	371 aa	Known RBP	13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	OR2B6	P58173	313 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	COPZ1	P61923	177 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	COQ5	Q5HYK3	327 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	GTF2IRD2B	Q6EKJ0	949 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	WBP2NL	Q6ICG8	309 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	CPLX4	Q7Z7G2	160 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	GTF2IRD2	Q86UP8	949 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	KIF18B	Q86Y91	864 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	ARMC8	Q8IUR7	673 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	OR6K3	Q8NGY3	331 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	SPATA5L1	Q9BVQ7	753 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	PLSCR4	Q9NRQ2	329 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	GLRX2	Q9NS18	164 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	ANGPT4	Q9Y264	503 aa		13.62	□□□□□ -0.23
RAB35-205	ENST00000543364	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.61	□□□□□ -0.23
RAB35-205	ENST00000543364	CSMD1	Q96PZ7	3565 aa		13.61	□□□□□ -0.23
RAB35-205	ENST00000543364	TUBAL3	A6NHL2	446 aa		13.61	□□□□□ -0.23
RAB35-205	ENST00000543364	AIM2	O14862	343 aa		13.61	□□□□□ -0.23

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