RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 ZNF267Q14586 743 aaPredicted RBP9.07□□□□□ -0.96
SS18-205ENST00000542420 SMAD2Q15796 467 aaKnown RBP9.07□□□□□ -0.96
SS18-205ENST00000542420 ZNF79Q15937 498 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 WBP2NLQ6ICG8 309 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 CCBE1Q6UXH8 406 aaPredicted RBP9.07□□□□□ -0.96
SS18-205ENST00000542420 GDPD3Q7L5L3 318 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 ZAR1Q86SH2 424 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 LHFPL3Q86UP9 236 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 SLC51BQ86UW2 128 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 MARCH9Q86YJ5 346 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 BBS1Q8NFJ9 593 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 OR2T27Q8NH04 317 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 OR51Q1Q8NH59 317 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 C16orf52Q8NHV5 167 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 NEIL3Q8TAT5 605 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 PTP4A1Q93096 173 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 ZC3HAV1LQ96H79 300 aaKnown RBP9.07□□□□□ -0.96
SS18-205ENST00000542420 TTYH2Q9BSA4 534 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 ADGRL4Q9HBW9 690 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 ATP13A2Q9NQ11 1180 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 UBQLN4Q9NRR5 601 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 HCN3Q9P1Z3 774 aa9.07□□□□□ -0.96
SS18-205ENST00000542420 IGKV3D-11A0A0A0MRZ8 115 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 NPIPA5A0A0B4J1W7 369 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 A0A1W2PQD3 144 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 A0A1W2PQL4 384 aaPredicted RBP9.06□□□□□ -0.96
SS18-205ENST00000542420 OR6C76A6NM76 312 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 NPIPA7E9PJI5 369 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 H3BMH7 237 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 H3BQ06 376 aaPredicted RBP9.06□□□□□ -0.96
SS18-205ENST00000542420 TO15178 435 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 TMCC2O75069 709 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 OR7A10O76100 309 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 SLC2A10O95528 541 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 LALBAP00709 142 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 CSTAP01040 98 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 NPIPA8P0DM63 369 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 IL7P13232 177 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 M6PRP20645 277 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 CASP3P42574 277 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 GPLD1P80108 840 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 DEFB110Q30KQ9 67 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 ZNF542PQ5EBM4 170 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 EMC4Q5J8M3 183 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 VASNQ6EMK4 673 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 ZNF544Q6NX49 715 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 THSD4Q6ZMP0 1018 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 PRSS42Q7Z5A4 293 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 MEX3DQ86XN8 651 aaKnown RBP9.06□□□□□ -0.96
SS18-205ENST00000542420 LAX1Q8IWV1 398 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 OR51G2Q8NGK0 314 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 SPACA7Q96KW9 195 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 CMTM3Q96MX0 182 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 MNTQ99583 582 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 SLC22A4Q9H015 551 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 UBE2ZQ9H832 354 aaPredicted RBP9.06□□□□□ -0.96
SS18-205ENST00000542420 ABCB9Q9NP78 766 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 POLE4Q9NR33 117 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 LANCL2Q9NS86 450 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 STARD5Q9NSY2 213 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 WNT16Q9UBV4 365 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 TBC1D24Q9ULP9 559 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 EML5Q05BV3 1969 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 FABP12A6NFH5 140 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 HSPB2A8KAH6 182 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 ERVH48-1M5A8F1 160 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 TOX3O15405 576 aaPredicted RBP9.06□□□□□ -0.96
SS18-205ENST00000542420 NUDT21O43809 227 aaKnown RBP9.06□□□□□ -0.96
SS18-205ENST00000542420 SC5DO75845 299 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 CELP19835 753 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 CD1CP29017 333 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 SSTR4P31391 388 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 RORAP35398 523 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 HSPB2Q16082 182 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 AGAP6Q5VW22 663 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 HBMQ6B0K9 141 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 PLXDC1Q8IUK5 500 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 C17orf47Q8NEP4 570 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 OR5W2Q8NH69 310 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 C1orf216Q8TAB5 229 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 DNASE2BQ8WZ79 361 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 OTULINQ96BN8 352 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 MMABQ96EY8 250 aaPredicted RBP9.06□□□□□ -0.96
SS18-205ENST00000542420 DIRAS2Q96HU8 199 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 AGAP4Q96P64 663 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 TIMP4Q99727 224 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 ATF6BQ99941 703 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 OR2B2Q9GZK3 357 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 TOR4AQ9NXH8 423 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 ERVK-19Q9WJR5 959 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 OR10H1Q9Y4A9 318 aa9.06□□□□□ -0.96
SS18-205ENST00000542420 TRAV1-2A0A0B4J238 106 aa9.05□□□□□ -0.96
SS18-205ENST00000542420 OGG1O15527 345 aa9.05□□□□□ -0.96
SS18-205ENST00000542420 GPRIN2O60269 458 aa9.05□□□□□ -0.96
SS18-205ENST00000542420 GATBO75879 557 aaKnown RBP9.05□□□□□ -0.96
SS18-205ENST00000542420 TXNDC12O95881 172 aa9.05□□□□□ -0.96
SS18-205ENST00000542420 CTRB1P17538 263 aa9.05□□□□□ -0.96
SS18-205ENST00000542420 EVX1P49640 407 aa9.05□□□□□ -0.96
SS18-205ENST00000542420 SEPHS1P49903 392 aa9.05□□□□□ -0.96
SS18-205ENST00000542420 SLC25A1P53007 311 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms