RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 ZNF607Q96SK3 696 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 SPATA5L1Q9BVQ7 753 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 SFXN3Q9BWM7 321 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 LAT2Q9GZY6 243 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 QRSL1Q9H0R6 528 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 DSN1Q9H410 356 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 CALHM2Q9HA72 323 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 CACYBPQ9HB71 228 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 EXOSC3Q9NQT5 275 aaKnown RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 CMTM6Q9NX76 183 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 NDE1Q9NXR1 346 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 MED11Q9P086 117 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 ABCD2Q9UBJ2 740 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 ICAM5Q9UMF0 924 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF232Q9UNY5 417 aa7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 GPC6Q9Y625 555 aaPredicted RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 NSD1Q96L73 2696 aaPredicted RBP7.82□□□□□ -1.16
CLSTN3-212ENST00000541770 MED12LQ86YW9 2145 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 C7orf72A4D263 438 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 C17orf51A8MQB3 221 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 LINC01387J3KSC0 135 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 GTPBP1O00178 669 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 HCRTR2O43614 444 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 ZIC3O60481 467 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 SERPINB7O75635 380 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 PABPC4LP0CB38 370 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 CHMP24386 653 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 PRKAR1BP31321 381 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 GCKP35557 465 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 PTH2RP49190 550 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 SLC7A2P52569 658 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 EEFSECP57772 596 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 PSME3P61289 254 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 EEF1A1P68104 462 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 PLAURQ03405 335 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 FAM27E3Q08E93 113 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 SKP2Q13309 424 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 CBFBQ13951 182 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 RPS26P11Q5JNZ5 115 aaPredicted RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 MRPL2Q5T653 305 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 RNF220Q5VTB9 566 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 DHRS4L2Q6PKH6 230 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 CBLN3Q6UW01 205 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 CCDC80Q76M96 950 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 PATL1Q86TB9 770 aaKnown RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 PGAM4Q8N0Y7 254 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 MAPK1IP1LQ8NDC0 245 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 BHLHE22Q8NFJ8 381 aaPredicted RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 OR2T12Q8NG77 320 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 OR52P1PQ8NH57 321 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 OR5W2Q8NH69 310 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 GPR119Q8TDV5 335 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 SLC35B4Q969S0 331 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 WFIKKN1Q96NZ8 548 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 TM9SF2Q99805 663 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 TUBA1CQ9BQE3 449 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 MED18Q9BUE0 208 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 ARMC7Q9H6L4 198 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 SPAG4Q9NPE6 437 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF226Q9NYT6 803 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 TAS2R10Q9NYW0 307 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 TMEM181Q9P2C4 612 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 DKKL1Q9UK85 242 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF443Q9Y2A4 671 aaPredicted RBP7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 CARD8Q9Y2G2 431 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 TESMINQ9Y4I5 508 aa7.81□□□□□ -1.16
CLSTN3-212ENST00000541770 RAI1Q7Z5J4 1906 aaPredicted RBP7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 ELOVL7A1L3X0 281 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 CDHR4A6H8M9 788 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 PRORSD1PA6NEY8 169 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 CCT8L1PA6NM43 557 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 CLDN24A6NM45 220 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 A8MXE2 369 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 ETV2O00321 342 aaPredicted RBP7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 FAAHO00519 579 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 NME4O00746 187 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 SIAH2O43255 324 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 OIP5O43482 229 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 GCM2O75603 506 aaPredicted RBP7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 MFN2O95140 757 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 RCBTB2O95199 551 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 ACTL6AO96019 429 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 IFNA2P01563 188 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 LINGO3P0C6S8 592 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 UBTFL6P0CB48 400 aaPredicted RBP7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 T-ENOLP0DO92 83 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF17P17021 662 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 PGCP20142 388 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 ADH6P28332 368 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 SLC6A8P48029 635 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 KCNJ5P48544 419 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF41P51814 821 aaPredicted RBP7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 GFRA1P56159 465 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 LIPEQ05469 1076 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 DMTNQ08495 405 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 TMEM44Q2T9K0 475 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 PLPPR5Q32ZL2 321 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 SPATS1Q496A3 300 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 SLC25A53Q5H9E4 307 aa7.8□□□□□ -1.16
CLSTN3-212ENST00000541770 ZNF311Q5JNZ3 666 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms