RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 DEFB127Q9H1M4 99 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 YY1AP1Q9H869 796 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 DNAJB9Q9UBS3 223 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 OSGIN1Q9UJX0 560 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 MAGED1Q9Y5V3 778 aaPredicted RBP8.45□□□□□ -1.06
DDX55-208ENST00000541259 LIPGQ9Y5X9 500 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 LYVE1Q9Y5Y7 322 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 U3KQV3 271 aa8.45□□□□□ -1.06
DDX55-208ENST00000541259 IGKV1D-42A0A075B6H8 117 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 A0A087WZY1 265 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 TMED7-TICAM2A0A0A6YYA0 188 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 TMEM72A0PK05 275 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 FAM47E-STBD1D6RA91 191 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 TNFRSF11BO00300 401 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 GNGT2O14610 69 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 GADD45GO95257 159 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 RASAL1O95294 804 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 ATP6V1G2O95670 118 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 LDLRP01130 860 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 HPNP05981 417 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 H1F0P07305 194 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 UQCRBP14927 111 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 HOXB6P17509 224 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 LIMS1P48059 325 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 DLX5P56178 289 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 ST3GAL3Q11203 375 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 SLC25A53Q5H9E4 307 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 FGD3Q5JSP0 725 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 ANKRD34AQ69YU3 496 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 RPUSD3Q6P087 351 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 PODNL1Q6PEZ8 512 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 LINC00114Q6XXX2 140 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 GRINAQ7Z429 371 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 MEX3DQ86XN8 651 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 HS3ST5Q8IZT8 346 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 PQLC1Q8N2U9 271 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 FAM98AQ8NCA5 519 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 ATP6V1C2Q8NEY4 427 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 OR14L1PQ8NHC6 308 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 TMEM255BQ8WV15 326 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 TMEM234Q8WY98 164 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 ST8SIA1Q92185 356 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 SLC38A4Q969I6 547 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 PNPLA2Q96AD5 504 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 DNAJA3Q96EY1 480 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 ALPK1Q96QP1 1244 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 FUZQ9BT04 418 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 OR2B2Q9GZK3 357 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 POLR2J2Q9GZM3 115 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 POLR2J3Q9H1A7 115 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 SLC6A15Q9H2J7 730 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 DCLRE1BQ9H816 532 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 HHATLQ9HCP6 504 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 B4GALT7Q9UBV7 327 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 SLC6A5Q9Y345 797 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 TMED7Q9Y3B3 224 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 MRPS18CQ9Y3D5 142 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 ZNF337Q9Y3M9 751 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 SAMHD1Q9Y3Z3 626 aaKnown RBP8.44□□□□□ -1.06
DDX55-208ENST00000541259 EPG5Q9HCE0 2579 aa8.44□□□□□ -1.06
DDX55-208ENST00000541259 A0A087WUJ7 227 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 A0A087WUU8 490 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 A0A1W2PRQ8 180 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 ZC3H12DA2A288 527 aaKnown RBP8.43□□□□□ -1.06
DDX55-208ENST00000541259 OR2M5A3KFT3 312 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 SAC3D1A6NKF1 404 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 ELOA3DA6NLF2 546 aaPredicted RBP8.43□□□□□ -1.06
DDX55-208ENST00000541259 ADAMDEC1O15204 470 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 ZNHIT1O43257 154 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 CHP2O43745 196 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 SUSD5O60279 629 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 PIP5K1CO60331 668 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 DEAF1O75398 565 aaPredicted RBP8.43□□□□□ -1.06
DDX55-208ENST00000541259 THRBP10828 461 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 FCGR1AP12314 374 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 PRKACGP22612 351 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 CXCR1P25024 350 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 APOBEC1P41238 236 aaKnown RBP8.43□□□□□ -1.06
DDX55-208ENST00000541259 STARP49675 285 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 POLR2HP52434 150 aaKnown RBP8.43□□□□□ -1.06
DDX55-208ENST00000541259 HMGA2P52926 109 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 UGT2B15P54855 530 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 EGR4Q05215 589 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 RIPK1Q13546 671 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 DGCR6Q14129 220 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 SLC10A1Q14973 349 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 TRAM2Q15035 370 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 ELOA3BQ3SY89 546 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 CMPK2Q5EBM0 449 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 C1QL3Q5VWW1 255 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 RAET1LQ5VY80 246 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 FBXW10Q5XX13 1052 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 SLC22A16Q86VW1 577 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 SIAH3Q8IW03 269 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 GTPBP8Q8N3Z3 284 aaPredicted RBP8.43□□□□□ -1.06
DDX55-208ENST00000541259 FAM109AQ8N4B1 249 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 CISD2Q8N5K1 135 aaKnown RBP8.43□□□□□ -1.06
DDX55-208ENST00000541259 TEX19Q8NA77 164 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 ICA1LQ8NDH6 482 aa8.43□□□□□ -1.06
DDX55-208ENST00000541259 ELOA3Q8NG57 546 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms