RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 FCRLAQ7L513 359 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF610Q8N9Z0 462 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 HIPK4Q8NE63 616 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 OR10A6Q8NH74 314 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 SLC25A43Q8WUT9 341 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 C14orf79Q96F83 325 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 WFDC6Q9BQY6 131 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 FAM107BQ9H098 131 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 PIF1Q9H611 641 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 CACYBPQ9HB71 228 aaKnown RBP16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 CRIM1Q9NZV1 1036 aa16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 FOXD3Q9UJU5 478 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 ING1Q9UK53 422 aaPredicted RBP16.33■□□□□ 0.2
SNRPA1-203ENST00000540017 ZC3H12DA2A288 527 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 BBIP1A8MTZ0 92 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 MAST4O15021 2626 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 SMAD9O15198 467 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 SLC22A2O15244 555 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 PLGP00747 810 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 AGTR1P30556 359 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 PRKAR1BP31321 381 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 KIR2DL3P43628 341 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 HTR3AP46098 478 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 PCBP3P57721 371 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 DMTNQ08495 405 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 RBBP4Q09028 425 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 MYBPHQ13203 477 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 CYLC2Q14093 348 aaPredicted RBP16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 MAPRE2Q15555 327 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 ZSWIM7Q19AV6 140 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 DHRS4L2Q6PKH6 230 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF550Q7Z398 422 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 MTDHQ86UE4 582 aaKnown RBP16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 KRT73Q86Y46 540 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 TREML1Q86YW5 311 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 NAV2Q8IVL1 2488 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 CADM2Q8N3J6 435 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 C11orf65Q8NCR3 313 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 LRRC46Q96FV0 321 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 ARMC7Q9H6L4 198 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 KCNN3Q9UGI6 736 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 USP22Q9UPT9 525 aa16.32■□□□□ 0.2
SNRPA1-203ENST00000540017 SULT2B1O00204 365 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 MFN2O95140 757 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 FESP07332 822 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 CD8BP10966 210 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 UQCRBP14927 111 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 SSTR2P30874 369 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 CPOXP36551 454 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 CTBP2P56545 445 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 GNGT1P63211 74 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 TLE4Q04727 773 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 FAM27E3Q08E93 113 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 BNIP2Q12982 314 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 WBP2NLQ6ICG8 309 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 NUFIP2Q7Z417 695 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 CALHM3Q86XJ0 350 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 TUSC5Q8IXB3 177 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 OR6K3Q8NGY3 331 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 LINC01560Q8TB33 94 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 RCN3Q96D15 328 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 REXO5Q96IC2 774 aaKnown RBP16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF607Q96SK3 696 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 SPATA5L1Q9BVQ7 753 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 PRR14Q9BWN1 585 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 PLSCR4Q9NRQ2 329 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 GLRX2Q9NS18 164 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 PROCRQ9UNN8 238 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 ANGPT4Q9Y264 503 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 EMC9Q9Y3B6 208 aa16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 SPIN1Q9Y657 262 aaPredicted RBP16.31■□□□□ 0.2
SNRPA1-203ENST00000540017 NOTCH2Q04721 2471 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 ABCA12Q86UK0 2595 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 GMNCA6NCL1 334 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF814B7Z6K7 855 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF208O43345 1280 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 SNX3O60493 162 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 CCDC22O60826 627 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 PRKD3O94806 890 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 PMS2P2O95744 297 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 NPPAP01160 153 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 OPN1SWP03999 348 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 IMPDH2P12268 514 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 COX4I1P13073 169 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 HTR2AP28223 471 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 CLK1P49759 484 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 SORDQ00796 357 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 RNPS1Q15287 305 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 GTF2IRD2BQ6EKJ0 949 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 GTF2IRD2Q86UP8 949 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 KIF18BQ86Y91 864 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 ARMC8Q8IUR7 673 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 SMYD1Q8NB12 490 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 OR8J3Q8NGG0 315 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 RP9Q8TA86 221 aaKnown RBP16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 SLC35B4Q969S0 331 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 C3orf49Q96BT1 292 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 PSD2Q9BQI7 771 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 ZNF559Q9BR84 538 aa16.3■□□□□ 0.2
SNRPA1-203ENST00000540017 MYLK2Q9H1R3 596 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms