RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 SUSD5O60279 629 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 IGHG3P01860 377 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 POLR2HP52434 150 aaKnown RBP13.96□□□□□ -0.17
DDB1-216ENST00000539739 DLX5P56178 289 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 FOXD4Q12950 439 aaPredicted RBP13.96□□□□□ -0.17
DDB1-216ENST00000539739 ZNF324BQ6AW86 544 aaPredicted RBP13.96□□□□□ -0.17
DDB1-216ENST00000539739 ULK3Q6PHR2 472 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 TRILQ7L0X0 811 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 NEIL3Q8TAT5 605 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 MPP4Q96JB8 637 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 PRRC1Q96M27 445 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 GPR137Q96N19 417 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 ADAM19Q9H013 955 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 SLC6A15Q9H2J7 730 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 CTPS2Q9NRF8 586 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 ASF1BQ9NVP2 202 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 NDUFAF4Q9P032 175 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 FBXO9Q9UK97 447 aaPredicted RBP13.96□□□□□ -0.17
DDB1-216ENST00000539739 NTNG1Q9Y2I2 539 aa13.96□□□□□ -0.17
DDB1-216ENST00000539739 NBEAQ8NFP9 2946 aa13.96□□□□□ -0.18
DDB1-216ENST00000539739 SH3PXD2BA1X283 911 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 OR2M5A3KFT3 312 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 SHISA8B8ZZ34 492 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 OR5F1O95221 314 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 GSTT2P0CG29 244 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 GSTT2BP0CG30 244 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 RHCEP18577 417 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 CHMP24386 653 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 CXCR1P25024 350 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 MST1P26927 711 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 ELK4P28324 431 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 TACR3P29371 465 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 YAP1P46937 504 aaKnown RBP13.95□□□□□ -0.18
DDB1-216ENST00000539739 VLDLRP98155 873 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 CCNIQ14094 377 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 TMEM44Q2T9K0 475 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.95□□□□□ -0.18
DDB1-216ENST00000539739 ALG10BQ5I7T1 473 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 POMZP3Q6PJE2 187 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 GHDCQ8N2G8 530 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 OR5M1Q8NGP8 315 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 POC1BQ8TC44 478 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 CPT1CQ8TCG5 803 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 PHF10Q8WUB8 498 aaKnown RBP13.95□□□□□ -0.18
DDB1-216ENST00000539739 C3orf49Q96BT1 292 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 ZNF524Q96C55 264 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 ZNF300Q96RE9 604 aaPredicted RBP13.95□□□□□ -0.18
DDB1-216ENST00000539739 ZNF347Q96SE7 839 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 DENND2DQ9H6A0 471 aaPredicted RBP13.95□□□□□ -0.18
DDB1-216ENST00000539739 C12orf10Q9HB07 376 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 CCM2LQ9NUG4 571 aaPredicted RBP13.95□□□□□ -0.18
DDB1-216ENST00000539739 STX18Q9P2W9 335 aaKnown RBP13.95□□□□□ -0.18
DDB1-216ENST00000539739 OSGIN1Q9UJX0 560 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 SLC6A5Q9Y345 797 aa13.95□□□□□ -0.18
DDB1-216ENST00000539739 SPIN1Q9Y657 262 aaPredicted RBP13.95□□□□□ -0.18
DDB1-216ENST00000539739 A0A0B4J2E0 115 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 A0A1B0GX12 115 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 IDH3BO43837 385 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 NTN1O95631 604 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 PNMTP11086 282 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 FKBP2P26885 142 aaKnown RBP13.94□□□□□ -0.18
DDB1-216ENST00000539739 MAGEA2P43356 314 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 MAP2K6P52564 334 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 GFRA1P56159 465 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 FOXK1P85037 733 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 ST3GAL3Q11203 375 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 PIN1Q13526 163 aaPredicted RBP13.94□□□□□ -0.18
DDB1-216ENST00000539739 ARHGAP11AQ6P4F7 1023 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 PIWIL3Q7Z3Z3 882 aaKnown RBP13.94□□□□□ -0.18
DDB1-216ENST00000539739 SLC41A3Q96GZ6 507 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 FNDC11Q9BVV2 318 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 CHID1Q9BWS9 393 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 RIMS3Q9UJD0 308 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 LIPGQ9Y5X9 500 aa13.94□□□□□ -0.18
DDB1-216ENST00000539739 TMED7-TICAM2A0A0A6YYA0 188 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 A0A1B0GVC2 190 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ELOA3DA6NLF2 546 aaPredicted RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 EIF4E1BA6NMX2 242 aaKnown RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 J3KTA2 159 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 CHP2O43745 196 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ACTL6AO96019 429 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 THRBP10828 461 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 SLC7A1P30825 629 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 MLLT10P55197 1068 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 CDH12P55289 794 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 B3GALT5-AS1P59052 145 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 RAC1P63000 192 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 SELENBP1Q13228 472 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ELOA3BQ3SY89 546 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 PRR30Q53SZ7 412 aaPredicted RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 C3orf33Q6P1S2 294 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 ATG4DQ86TL0 474 aaPredicted RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 ELOA3Q8NG57 546 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 SLC38A4Q969I6 547 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 BARD1Q99728 777 aaKnown RBP13.93□□□□□ -0.18
DDB1-216ENST00000539739 NPAS1Q99742 590 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 PIP5K1AQ99755 562 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 PLSCR2Q9NRY7 297 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 CHRNA9Q9UGM1 479 aa13.93□□□□□ -0.18
DDB1-216ENST00000539739 SLC7A7Q9UM01 511 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms