RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 SAP130Q9H0E3 1048 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 C12orf49Q9H741 205 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 TMEM185BQ9H7F4 350 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 SAR1AQ9NR31 198 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.31□□□□□ -0.28
USB1-203ENST00000539737 GDF2Q9UK05 429 aaPredicted RBP13.31□□□□□ -0.28
USB1-203ENST00000539737 MKLN1Q9UL63 735 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 MCTS1Q9ULC4 181 aaKnown RBP13.31□□□□□ -0.28
USB1-203ENST00000539737 VDAC3Q9Y277 283 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 GMEB1Q9Y692 573 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 CAPN7Q9Y6W3 813 aa13.31□□□□□ -0.28
USB1-203ENST00000539737 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.31□□□□□ -0.283e-7■□□□□ 10
USB1-203ENST00000539737 TRBV5-3A0A0A0MS03 114 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 BBIP1A8MTZ0 92 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 GTPBP1O00178 669 aaKnown RBP13.3□□□□□ -0.28
USB1-203ENST00000539737 EIF1AYO14602 144 aaKnown RBP13.3□□□□□ -0.28
USB1-203ENST00000539737 CLOCKO15516 846 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 FCMRO60667 390 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 CCDC22O60826 627 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 ADAM11O75078 769 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 SYNGR4O95473 234 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 C1QCP02747 245 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 UBL4AP11441 157 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 ETFAP13804 333 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 ZNF17P17021 662 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 EIF1AXP47813 144 aaKnown RBP13.3□□□□□ -0.28
USB1-203ENST00000539737 RNF144AP50876 292 aaPredicted RBP13.3□□□□□ -0.28
USB1-203ENST00000539737 CRISP3P54108 245 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 ZNF117Q03924 483 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 RGNQ15493 299 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 SYPL1Q16563 259 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 COQ5Q5HYK3 327 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 MSRB3Q8IXL7 192 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 ANKFN1Q8N957 763 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 TOR1AIP2Q8NFQ8 470 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 ZBTB8AQ96BR9 441 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 SH3YL1Q96HL8 342 aaPredicted RBP13.3□□□□□ -0.28
USB1-203ENST00000539737 REG4Q9BYZ8 158 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 FAM107BQ9H098 131 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 SLC25A37Q9NYZ2 338 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 VAPAQ9P0L0 249 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 SLC35A3Q9Y2D2 325 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 EMC9Q9Y3B6 208 aa13.3□□□□□ -0.28
USB1-203ENST00000539737 MAGED1Q9Y5V3 778 aaPredicted RBP13.3□□□□□ -0.28
USB1-203ENST00000539737 PRAMEF27A3QJZ7 478 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 GMNCA6NCL1 334 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 SERINC4A6NH21 518 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 EVPLLA8MZ36 301 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 ZNF264O43296 627 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 EIF4E2O60573 245 aaKnown RBP13.29□□□□□ -0.28
USB1-203ENST00000539737 UGT2B17O75795 530 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 IGHV4-39P01824 125 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 BCHEP06276 602 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 CHRM4P08173 479 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 BMP2P12643 396 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 SEC24CP53992 1094 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 CTBP2P56545 445 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 KLF10Q13118 480 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 NFYCQ13952 458 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 GCNT6Q5T4J0 391 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 GTF2IRD2BQ6EKJ0 949 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 EIF3MQ7L2H7 374 aaKnown RBP13.29□□□□□ -0.28
USB1-203ENST00000539737 FAM214BQ7L5A3 538 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 CPLX4Q7Z7G2 160 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 GTF2IRD2Q86UP8 949 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 TMCO5AQ8N6Q1 288 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 ZNF611Q8N823 705 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 KBTBD8Q8NFY9 601 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 HTRA1Q92743 480 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 REXO5Q96IC2 774 aaKnown RBP13.29□□□□□ -0.28
USB1-203ENST00000539737 TMEM204Q9BSN7 226 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 SLC38A1Q9H2H9 487 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 CXorf56Q9H5V9 222 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 CACYBPQ9HB71 228 aaKnown RBP13.29□□□□□ -0.28
USB1-203ENST00000539737 A4GALTQ9NPC4 353 aa13.29□□□□□ -0.28
USB1-203ENST00000539737 C7orf72A4D263 438 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 PHF1O43189 567 aaPredicted RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 CXCL13O43927 109 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 NUDT14O95848 222 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 CSTAP01040 98 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 DBIP07108 87 aaKnown RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 PAX1P15863 534 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 IL11P20809 199 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 DRD4P21917 467 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 SHC1P29353 583 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 PCYT1AP49585 367 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 P2RX1P51575 399 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 GYS2P54840 703 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 CHRNEQ04844 493 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 TRMT5Q32P41 509 aaKnown RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 MMEL1Q495T6 779 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 PRAMEF8Q5VWM4 474 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 PRAMEF7Q5VXH5 474 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 DLEU7Q6UYE1 221 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 OLIG3Q7RTU3 272 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 RETREG3Q86VR2 466 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 CMIPQ8IY22 773 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 PEX5LQ8IYB4 626 aa13.28□□□□□ -0.28
USB1-203ENST00000539737 GTPBP8Q8N3Z3 284 aaPredicted RBP13.28□□□□□ -0.28
USB1-203ENST00000539737 METTL25Q8N6Q8 603 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms