RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 JADE3Q92613 823 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 AMDHD1Q96NU7 426 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 ANKRD27Q96NW4 1050 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 CITED4Q96RK1 184 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 BRF2Q9HAW0 419 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 CPSF2Q9P2I0 782 aaKnown RBP7.1□□□□□ -1.27
CLIP1-206ENST00000535290 CRNNQ9UBG3 495 aaPredicted RBP7.1□□□□□ -1.27
CLIP1-206ENST00000535290 VPS29Q9UBQ0 182 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 REV1Q9UBZ9 1251 aa7.1□□□□□ -1.27
CLIP1-206ENST00000535290 TNPO3Q9Y5L0 923 aaKnown RBP7.1□□□□□ -1.27
CLIP1-206ENST00000535290 EPPK1P58107 5090 aaKnown RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 OR6C65A6NJZ3 312 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 SLC22A31A6NKX4 558 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 TTC36A6NLP5 189 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 VSTM5A8MXK1 200 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 ETV2O00321 342 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 NCR1O76036 304 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 SLITRK5O94991 958 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 IGLV1-44P01699 117 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 ACP2P11117 423 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 DDCP20711 480 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 GPC1P35052 558 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 SEC24CP53992 1094 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 SUMO3P55854 103 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 POU3F1Q03052 451 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 MVKQ03426 396 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 ILF2Q12905 390 aaKnown RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 PDIA2Q13087 525 aaKnown RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 QPRTQ15274 297 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 DUSP5Q16690 384 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 TBRG1Q3YBR2 411 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 GGTA1PQ4G0N0 100 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 KLHL26Q53HC5 615 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 KLF17Q5JT82 389 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 AVPI1Q5T686 147 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 KPRPQ5T749 579 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 SAXO2Q658L1 398 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 LETMD1Q6P1Q0 360 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 C3orf33Q6P1S2 294 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 C16orf87Q6PH81 154 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 LRIG3Q6UXM1 1119 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 RPS27LQ71UM5 84 aaKnown RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 ZNF551Q7Z340 670 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 PTGR2Q8N8N7 351 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 OR6Y1Q8NGX8 325 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 OTUB1Q96FW1 271 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 APIPQ96GX9 242 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 BOD1Q96IK1 185 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 GPA33Q99795 319 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 CPNE1Q99829 537 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 RSPO3Q9BXY4 272 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 EBPLQ9BY08 206 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 OBP2BQ9NPH6 170 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 NMRK1Q9NWW6 199 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 TXNDC16Q9P2K2 825 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 PCTPQ9UKL6 214 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 NUP50Q9UKX7 468 aa7.09□□□□□ -1.27
CLIP1-206ENST00000535290 SOX21Q9Y651 276 aaPredicted RBP7.09□□□□□ -1.27
CLIP1-206ENST00000535290 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 IGHV2OR16-5A0A0B4J2B6 119 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 A0A1B0GUS0 222 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 CCDC151A5D8V7 595 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 M0R233 179 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PIP5K1BO14986 540 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 SYNGR3O43761 229 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 SKAP2O75563 359 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-206ENST00000535290 LGI1O95970 557 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PRPS2P11908 318 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 SELEP16581 610 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 TSPAN8P19075 237 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 CRABP2P29373 138 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 SSTR1P30872 391 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 ALDH3B1P43353 468 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 ASMTP46597 345 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 FNTAP49354 379 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PRKAG1P54619 331 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 ARL4CP56559 192 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 CSNK2A1P68400 391 aaPredicted RBP7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PRR20EP86478 221 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PRR20CP86479 221 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PRR20DP86480 221 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PRR20BP86481 221 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PRR20AP86496 221 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 RELBQ01201 579 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 C2orf80Q0P641 193 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 FAM189A2Q15884 450 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 VPS26BQ4G0F5 336 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 SYT14P1Q58G82 188 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 COX20Q5RI15 118 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLIP1-206ENST00000535290 OLFML2AQ68BL7 652 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 METTL2BQ6P1Q9 378 aaKnown RBP7.08□□□□□ -1.28
CLIP1-206ENST00000535290 MTERF4Q7Z6M4 381 aaKnown RBP7.08□□□□□ -1.28
CLIP1-206ENST00000535290 GAS2L3Q86XJ1 694 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 OR5W2Q8NH69 310 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 RFWD2Q8NHY2 731 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PIGXQ8TBF5 258 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 MRAPQ8TCY5 172 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 GRK7Q8WTQ7 553 aa7.08□□□□□ -1.28
CLIP1-206ENST00000535290 PHF21BQ96EK2 531 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms