RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 ANGPT4Q9Y264 503 aa18.28■□□□□ 0.52
CCS-208ENST00000533244 TMED7-TICAM2A0A0A6YYA0 188 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 ZNF208O43345 1280 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 GCM2O75603 506 aaPredicted RBP18.27■□□□□ 0.52
CCS-208ENST00000533244 TACR3P29371 465 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 UQCRC1P31930 480 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 PEX19P40855 299 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 PCYT1AP49585 367 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 MAP2K6P52564 334 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 SIRPAP78324 504 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 SORDQ00796 357 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 RABL3Q5HYI8 236 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 PPP4R4Q6NUP7 873 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 TMPPEQ6ZT21 453 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 GDF7Q7Z4P5 450 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 LUZP2Q86TE4 346 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 CALHM3Q86XJ0 350 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 PCYOX1LQ8NBM8 494 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 OR10A6Q8NH74 314 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 ROBO4Q8WZ75 1007 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 OR5B2Q96R09 309 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 ZNF607Q96SK3 696 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 SH3GL1Q99961 368 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 MYLK2Q9H1R3 596 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 SLC24A3Q9HC58 644 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 TMED7Q9Y3B3 224 aa18.27■□□□□ 0.52
CCS-208ENST00000533244 PRORSD1PA6NEY8 169 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 TPST1O60507 370 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 MFN2O95140 757 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 PCGF2P35227 344 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 DIO1P49895 249 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 GNGT1P63211 74 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 RNPS1Q15287 305 aaKnown RBP18.26■□□□□ 0.51
CCS-208ENST00000533244 WBP2NLQ6ICG8 309 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 MTDHQ86UE4 582 aaKnown RBP18.26■□□□□ 0.51
CCS-208ENST00000533244 SLC30A8Q8IWU4 369 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 OR6K3Q8NGY3 331 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 ARL5BQ96KC2 179 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 RBM24Q9BX46 236 aaKnown RBP18.26■□□□□ 0.51
CCS-208ENST00000533244 GP6Q9HCN6 339 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 GALNT8Q9NY28 637 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 KCNN3Q9UGI6 736 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 CLEC4AQ9UMR7 237 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 HDGFL3Q9Y3E1 203 aa18.26■□□□□ 0.51
CCS-208ENST00000533244 TMEM72A0PK05 275 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 SMAD9O15198 467 aaKnown RBP18.25■□□□□ 0.51
CCS-208ENST00000533244 FRS3O43559 492 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 SERPINB7O75635 380 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 PMS2P2O95744 297 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 ENPP1P22413 925 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 AQP1P29972 269 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 VMACQ2NL98 169 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 GLIPR1L2Q4G1C9 344 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 GTF2IRD2BQ6EKJ0 949 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 FCRLAQ7L513 359 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 GTF2IRD2Q86UP8 949 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 TREML1Q86YW5 311 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 SLC43A2Q8N370 569 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 POU5F2Q8N7G0 328 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 BHLHE22Q8NFJ8 381 aaPredicted RBP18.25■□□□□ 0.51
CCS-208ENST00000533244 ABHD3Q8WU67 409 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 RCN3Q96D15 328 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 OR11A1Q9GZK7 315 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 FAM107BQ9H098 131 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 GID8Q9NWU2 228 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 EMC9Q9Y3B6 208 aa18.25■□□□□ 0.51
CCS-208ENST00000533244 DNPH1O43598 174 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 PLGP00747 810 aaPredicted RBP18.24■□□□□ 0.51
CCS-208ENST00000533244 COX4I1P13073 169 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 AGTR1P30556 359 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 COPZ1P61923 177 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 CSNK2A1P68400 391 aaPredicted RBP18.24■□□□□ 0.51
CCS-208ENST00000533244 DMTNQ08495 405 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 MYBPHQ13203 477 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 ZNF474Q6S9Z5 364 aaPredicted RBP18.24■□□□□ 0.51
CCS-208ENST00000533244 CPLX4Q7Z7G2 160 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 KIF18BQ86Y91 864 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 ARMC8Q8IUR7 673 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 C3orf49Q96BT1 292 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 REXO5Q96IC2 774 aaKnown RBP18.24■□□□□ 0.51
CCS-208ENST00000533244 OPN3Q9H1Y3 402 aaPredicted RBP18.24■□□□□ 0.51
CCS-208ENST00000533244 PLSCR4Q9NRQ2 329 aa18.24■□□□□ 0.51
CCS-208ENST00000533244 ING1Q9UK53 422 aaPredicted RBP18.24■□□□□ 0.51
CCS-208ENST00000533244 SULT2B1O00204 365 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 CYTIPO60759 359 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 SMNDC1O75940 238 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCS-208ENST00000533244 TFPIP10646 304 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 KLK2P20151 261 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 SSTR2P30874 369 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 CPA2P48052 419 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 CTBP2P56545 445 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 CCDC80Q76M96 950 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 LSRQ86X29 649 aaPredicted RBP18.23■□□□□ 0.51
CCS-208ENST00000533244 CADM2Q8N3J6 435 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 LSMEM1Q8N8F7 131 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 DDIT4LQ96D03 193 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 ZNF583Q96ND8 569 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 PSD2Q9BQI7 771 aa18.23■□□□□ 0.51
CCS-208ENST00000533244 GPATCH1Q9BRR8 931 aaKnown RBP18.23■□□□□ 0.51
CCS-208ENST00000533244 EVA1AQ9H8M9 152 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms