RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 IQCF1Q8N6M8 205 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CAMKVQ8NCB2 501 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 XAGE5Q8WWM1 108 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 TSLPQ969D9 159 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 TM4SF19Q96DZ7 209 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 AMDHD1Q96NU7 426 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 PSD2Q9BQI7 771 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 FUZQ9BT04 418 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CDADC1Q9BWV3 514 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 OR51I1Q9H343 314 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 DDX31Q9H8H2 851 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 IMPAD1Q9NX62 359 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 DNAJC27Q9NZQ0 273 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CLEC2DQ9UHP7 191 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ST6GALNAC2Q9UJ37 374 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 A4GNTQ9UNA3 340 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 EDARQ9UNE0 448 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 FAM32AQ9Y421 112 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ATG4BQ9Y4P1 393 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 TACC2O95359 2948 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 A0A1W2PR48 441 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 METTL15A6NJ78 407 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 A8MVJ9 347 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CDC40O60508 579 aaKnown RBP eCLIP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 RDH16O75452 317 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CHRM4P08173 479 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 SLC15A1P46059 708 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 KCNJ5P48544 419 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 RGS6P49758 472 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CLK1P49759 484 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 PRKAG1P54619 331 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 SSX1Q16384 188 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 C18orf63Q68DL7 685 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 OR4C11Q6IEV9 310 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 PGBD2Q6P3X8 592 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ARHGAP11AQ6P4F7 1023 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 PAQR6Q6TCH4 344 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 NUDT13Q86X67 352 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 TAGAPQ8N103 731 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 STX19Q8N4C7 294 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 MCFD2Q8NI22 146 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ZCCHC10Q8TBK6 192 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 MYDGFQ969H8 173 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ZG16BQ96DA0 208 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CNRIP1Q96F85 164 aaPredicted RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 TRMT61AQ96FX7 289 aaKnown RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 CHCHD6Q9BRQ6 235 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 GSX1Q9H4S2 264 aaPredicted RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 ZNF556Q9HAH1 456 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 MAN2C1Q9NTJ4 1040 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 AHSPQ9NZD4 102 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 RPH3AQ9Y2J0 694 aaPredicted RBP7.51□□□□□ -1.21
NEDD8-207ENST00000533242 IFT52Q9Y366 437 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 SLC22A7Q9Y694 548 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 MTORP42345 2549 aa7.51□□□□□ -1.21
NEDD8-207ENST00000533242 C5orf58C9J3I9 102 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 TBX19O60806 448 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 IFNA14P01570 189 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 DNASE1P24855 282 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SSR2P43308 183 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CSNK2BP67870 215 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PMPCAQ10713 525 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SLC13A2Q13183 592 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 TRIM16LQ309B1 348 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PTCHD4Q6ZW05 846 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ASPGQ86U10 573 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CYP4Z2PQ8N1L4 340 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ZFP62Q8NB50 900 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SIMC1Q8NDZ2 872 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 FAM83FQ8NEG4 500 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 OR6T1Q8NGN1 323 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PSMA8Q8TAA3 256 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 FCGR1BQ92637 280 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 RGMAQ96B86 450 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 C16orf58Q96GQ5 468 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 PEX11GQ96HA9 241 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 DHRS1Q96LJ7 313 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 POLDIP3Q9BY77 421 aaKnown RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 WDR12Q9GZL7 423 aaKnown RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 NEUROD4Q9HD90 331 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ZCCHC3Q9NUD5 404 aaKnown RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CAB39Q9Y376 341 aaPredicted RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ARHGAP21Q5T5U3 1957 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SAGE2PA6NJ88 616 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 WWP2O00308 870 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ERI3O43414 337 aaKnown RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 FRS3O43559 492 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 OR10H3O60404 316 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 ERAL1O75616 437 aaKnown RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SERPINB7O75635 380 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CTAG2O75638 210 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 FHP07954 510 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CERS1P27544 350 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 CD40LGP29965 261 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 SOX3P41225 446 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 MAN2A2P49641 1150 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 NCBP2P52298 156 aaKnown RBP eCLIP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 RAB8AP61006 207 aa7.5□□□□□ -1.21
NEDD8-207ENST00000533242 LASP1Q14847 261 aaKnown RBP7.5□□□□□ -1.21
NEDD8-207ENST00000533242 MED22Q15528 200 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms