RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 SLC26A7Q8TE54 656 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 SLC25A43Q8WUT9 341 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-214ENST00000533209 C3orf49Q96BT1 292 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 KCTD14Q9BQ13 255 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-214ENST00000533209 ZNF559Q9BR84 538 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 PRR14Q9BWN1 585 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 SRXN1Q9BYN0 137 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 OR11A1Q9GZK7 315 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 EVA1AQ9H8M9 152 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 PAQR5Q9NXK6 330 aaPredicted RBP10.75□□□□□ -0.69
SSBP3-214ENST00000533209 KLHL28Q9NXS3 571 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 SLC13A4Q9UKG4 626 aa10.75□□□□□ -0.69
SSBP3-214ENST00000533209 PHF3Q92576 2039 aaKnown RBP10.75□□□□□ -0.69
SSBP3-214ENST00000533209 A0A1B0GWA3 101 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 A1L4Q6 167 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 B2RBV5 119 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CXCR6O00574 342 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 ZNF208O43345 1280 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 AQP8O94778 261 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 RCBTB2O95199 551 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CLDN14O95500 239 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CCNA2P20248 432 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CXCR1P25024 350 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 SLC7A1P30825 629 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CLK1P49759 484 aaKnown RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 MXRA7P84157 204 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 FOXF2Q12947 444 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 NPTX1Q15818 432 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 LRRC23Q53EV4 343 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CYBRD1Q53TN4 286 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 C16orf89Q6UX73 402 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 TRPM8Q7Z2W7 1104 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 P4HA3Q7Z4N8 544 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 ATG4DQ86TL0 474 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 RBM45Q8IUH3 476 aaKnown RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 RNF148Q8N7C7 305 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 LILRB4Q8NHJ6 448 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CA5BP1Q8WTZ4 195 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 RASSF5Q8WWW0 418 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 INTS12Q96CB8 462 aaKnown RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 ARL5BQ96KC2 179 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 ZFP3Q96NJ6 502 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 OR5B2Q96R09 309 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CDRT15Q96T59 188 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 TRIM2Q9C040 744 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 RNF122Q9H9V4 155 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 ASH1LQ9NR48 2969 aaKnown RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 ADA2Q9NZK5 511 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 TESQ9UGI8 421 aaKnown RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 CD300AQ9UGN4 299 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 PACSIN3Q9UKS6 424 aa10.74□□□□□ -0.69
SSBP3-214ENST00000533209 MCTS1Q9ULC4 181 aaKnown RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 SPIN1Q9Y657 262 aaPredicted RBP10.74□□□□□ -0.69
SSBP3-214ENST00000533209 FLNBO75369 2602 aaKnown RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 ZC3H12DA2A288 527 aaKnown RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 GSTA4O15217 222 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 FMO6PO60774 539 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 SYNGR4O95473 234 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 IFNA14P01570 189 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 TMIGD3P0DMS9 266 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 TFPIP10646 304 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 FCGR2AP12318 317 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 HSD17B1P14061 328 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 NCK1P16333 377 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 GGT1P19440 569 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 CALB2P22676 271 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 CTSSP25774 331 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 FKBP2P26885 142 aaKnown RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 HTR1EP28566 365 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 DIO1P49895 249 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 MAP2K6P52564 334 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 RAC3P60763 192 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 BNIP2Q12982 314 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 MYBPHQ13203 477 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 GUSBP1Q15486 140 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 OR1Q1Q15612 314 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 ZNF239Q16600 458 aaKnown RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 C6orf89Q6UWU4 347 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 RINLQ6ZS11 566 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 TMPPEQ6ZT21 453 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 DEFB107AQ8IZN7 70 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 GCNT2Q8N0V5 402 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 FAM156AQ8NDB6 213 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 RBM15BQ8NDT2 890 aaKnown RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 OR52E4Q8NGH9 312 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 OR6T1Q8NGN1 323 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 VANGL1Q8TAA9 524 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 ROBO4Q8WZ75 1007 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 PROX1Q92786 737 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 CPNE4Q96A23 557 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 MCHR1Q99705 422 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 UCK2Q9BZX2 261 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 TIGARQ9NQ88 270 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 NDE1Q9NXR1 346 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 RPS6KB2Q9UBS0 482 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 ZNF629Q9UEG4 869 aaPredicted RBP10.73□□□□□ -0.69
SSBP3-214ENST00000533209 BAG5Q9UL15 447 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 HDGFL3Q9Y3E1 203 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 ICE1Q9Y2F5 2266 aa10.73□□□□□ -0.69
SSBP3-214ENST00000533209 A0A0B4J2E0 115 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms