RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SH3GL1Q99961 368 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 PRR14Q9BWN1 585 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 OR11A1Q9GZK7 315 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 NSRP1Q9H0G5 558 aaKnown RBP12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 PIF1Q9H611 641 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 GID8Q9NWU2 228 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 CHRNA9Q9UGM1 479 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 TMED7Q9Y3B3 224 aa12.46□□□□□ -0.41
TSPAN4-220ENST00000532375 FBN2P35556 2912 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 TMEM72A0PK05 275 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 ZC3H12DA2A288 527 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 CCT8L1PA6NM43 557 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 GJE1A6NN92 205 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 A8MXE2 369 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 AIM2O14862 343 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 ZNF208O43345 1280 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 SHOX2O60902 331 aaPredicted RBP12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 LGI1O95970 557 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 PRF1P14222 555 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 CD247P20963 164 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 HTR2AP28223 471 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 KCNJ5P48544 419 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 CLK1P49759 484 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 ASCL1P50553 236 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 POLR2HP52434 150 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 PDSS1Q5T2R2 415 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 EEF1A1P5Q5VTE0 462 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 WBP2NLQ6ICG8 309 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 HACD2Q6Y1H2 254 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 P4HA3Q7Z4N8 544 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 KRT73Q86Y46 540 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 DMRTC2Q8IXT2 367 aaPredicted RBP12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 LSMEM1Q8N8F7 131 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 ANKS4BQ8N8V4 417 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 OR4D11Q8NGI4 311 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 RNF128Q8TEB7 428 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 SLC25A43Q8WUT9 341 aaPredicted RBP12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 C3orf49Q96BT1 292 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 REXO5Q96IC2 774 aaKnown RBP12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 SPATA5L1Q9BVQ7 753 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 SERINC1Q9NRX5 453 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 ANGPT4Q9Y264 503 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 ARL2BPQ9Y2Y0 163 aa12.45□□□□□ -0.42
TSPAN4-220ENST00000532375 NME4O00746 187 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 SMAD9O15198 467 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 HNRNPRO43390 633 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 SS18L1O75177 396 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 NPIPB7O75200 414 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 SERPINB7O75635 380 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 IMPDH2P12268 514 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 FKBP2P26885 142 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 PRDX6P30041 224 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 DIO1P49895 249 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 MAP2K6P52564 334 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 H3F3AP84243 136 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 MYBPHQ13203 477 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 VEZF1Q14119 521 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 NRF1Q16656 503 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 FAM91A1Q658Y4 838 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ZNF474Q6S9Z5 364 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 FAM214BQ7L5A3 538 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ATG4DQ86TL0 474 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ARMC8Q8IUR7 673 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 SLC30A8Q8IWU4 369 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 SMYD1Q8NB12 490 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ABHD3Q8WU67 409 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 RNASE6Q93091 150 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 CPNE4Q96A23 557 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 GMPPAQ96IJ6 420 aaPredicted RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 OR5B2Q96R09 309 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ZNF607Q96SK3 696 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ARHGDIGQ99819 225 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ECSITQ9BQ95 431 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ARMC7Q9H6L4 198 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 EFCAB1Q9HAE3 211 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 PLSCR4Q9NRQ2 329 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 ADAM21Q9UKJ8 722 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 PACSIN3Q9UKS6 424 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 MCTS1Q9ULC4 181 aaKnown RBP12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 CLEC4AQ9UMR7 237 aa12.44□□□□□ -0.42
TSPAN4-220ENST00000532375 IGHV3-15A0A0B4J1V0 119 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 PRORSD1PA6NEY8 169 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 ZNF814B7Z6K7 855 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 MSTNO14793 375 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 SYNGR4O95473 234 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 PMS2P2O95744 297 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 OPN1SWP03999 348 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 C8BP07358 591 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 CD8BP10966 210 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 FCGR2AP12318 317 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 CCNA2P20248 432 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 SLC7A1P30825 629 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 EGR4Q05215 589 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 BNIP2Q12982 314 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 NPTX1Q15818 432 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 C6orf89Q6UWU4 347 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 MEX3BQ6ZN04 569 aaKnown RBP12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 FCRLAQ7L513 359 aa12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 PATL1Q86TB9 770 aaKnown RBP12.43□□□□□ -0.42
TSPAN4-220ENST00000532375 TSPYL5Q86VY4 417 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms