RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 FAM45BPQ6NSW5 357 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 CCDC137Q6PK04 289 aaKnown RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 HSDL2Q6YN16 418 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 LINGO2Q7L985 606 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 THOC6Q86W42 341 aaKnown RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 CCDC71Q8IV32 467 aaPredicted RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 CNTN4Q8IWV2 1026 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 ZNF595Q8IYB9 648 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 NAT8LQ8N9F0 302 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 OR2M7Q8NG81 312 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 OR10Q1Q8NGQ4 319 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 FAM45AQ8TCE6 357 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 DAZLQ92904 295 aaKnown RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 NCLNQ969V3 563 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 TMCO6Q96DC7 493 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SMIM10Q96HG1 83 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 DGAT2Q96PD7 388 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 RAB3IPQ96QF0 476 aaPredicted RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SMC6Q96SB8 1091 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 EGFL8Q99944 293 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 FAM173AQ9BQD7 235 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 UCK2Q9BZX2 261 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 DEFB127Q9H1M4 99 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SPNS1Q9H2V7 528 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 HRH4Q9H3N8 390 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 ZDHHC11Q9H8X9 412 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 ADAP2Q9NPF8 381 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 PPANQ9NQ55 473 aaKnown RBP4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 PFDN4Q9NQP4 134 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 PRTFDC1Q9NRG1 225 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 SELENONQ9NZV5 590 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 CLCA3PQ9Y6N3 262 aa4.6□□□□□ -1.67
AMBRA1-209ENST00000529963 DNAJC13O75165 2243 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 PGRMC1O00264 195 aaKnown RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 ERI3O43414 337 aaKnown RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 PRKNO60260 465 aaPredicted RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 OR2J2O76002 312 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 OR6B1O95007 311 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 PRSS2P07478 247 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 GNAZP19086 355 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 CPT2P23786 658 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 CHATP28329 748 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 HNRNPH1P31943 449 aaKnown RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 PEX19P40855 299 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 ZFP36L2P47974 494 aaKnown RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 FNTAP49354 379 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 THBS3P49746 956 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 HNMTP50135 292 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 FOXG1P55316 489 aaPredicted RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 CCZ1BP86790 482 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 CCZ1P86791 482 aaPredicted RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 CDKL1Q00532 357 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 TGM3Q08188 693 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 EFTUD2Q15029 972 aaKnown RBP eCLIP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 PPP1R7Q15435 360 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 SLC25A35Q3KQZ1 300 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 RNASEH2BQ5TBB1 312 aaKnown RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 TRIM40Q6P9F5 258 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 C11orf88Q6PI97 169 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 SBSNQ6UWP8 590 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 TMIGD1Q6UXZ0 262 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 CFAP77Q6ZQR2 320 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 RTL4Q6ZR62 310 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 FRA10AC1Q70Z53 315 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 BIVMQ86UB2 503 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 KLHDC8AQ8IYD2 350 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 SAMD14Q8IZD0 417 aaPredicted RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 RASGEF1CQ8N431 466 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 RPRMLQ8N4K4 120 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 Q8NFD4 153 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 OR5L2Q8NGL0 311 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 OR5M9Q8NGP3 310 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 ANKRD7Q92527 254 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 MOAP1Q96BY2 351 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 CERS2Q96G23 380 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 PDLIM5Q96HC4 596 aaKnown RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 RASL10BQ96S79 203 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 FOXC2Q99958 501 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 TTTY12Q9BZ98 90 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 COPS7BQ9H9Q2 264 aaPredicted RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 IL1RL2Q9HB29 575 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 PNPLA3Q9NST1 481 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 DEPPQ9NTK1 212 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 ASIC3Q9UHC3 531 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 ZNF223Q9UK11 482 aaPredicted RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 ACAD8Q9UKU7 415 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 SLC22A14Q9Y267 594 aa4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 MAP1AP78559 2803 aaPredicted RBP4.59□□□□□ -1.67
AMBRA1-209ENST00000529963 ZNF407Q9C0G0 2248 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 AKAP6Q13023 2319 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 A0A0G2JN53 185 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 CTAGE15A4D2H0 777 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 ANKDD1BA6NHY2 528 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 C4orf51C9J302 202 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 G3V3Y1 287 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 WWP2O00308 870 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 DNALI1O14645 258 aaPredicted RBP4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 ADAMDEC1O15204 470 aa4.58□□□□□ -1.68
AMBRA1-209ENST00000529963 HCN1O60741 890 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms