RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ARHGEF9O43307 516 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 TMCC2O75069 709 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 ATE1O95260 518 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 FESP07332 822 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 THBS1P07996 1170 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 SHC1P29353 583 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 IDH3AP50213 366 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 RNF144AP50876 292 aaPredicted RBP8.55□□□□□ -1.04
CHD7-208ENST00000528280 ATP4BP51164 291 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 POLR2HP52434 150 aaKnown RBP8.55□□□□□ -1.04
CHD7-208ENST00000528280 SLC35A1P78382 337 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 FADDQ13158 208 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 ITGADQ13349 1161 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 DEFB113Q30KQ7 82 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 LIN52Q52LA3 116 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 SFRP5Q5T4F7 317 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 C1QTNF12Q5T7M4 302 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 GALNT5Q7Z7M9 940 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 P2RY8Q86VZ1 359 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 ADGRG3Q86Y34 549 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 ANKFN1Q8N957 763 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 OR52P1PQ8NH57 321 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 ABHD3Q8WU67 409 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 NRGNQ92686 78 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 GTF2H4Q92759 462 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 SLC35B4Q969S0 331 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 PIK3IP1Q96FE7 263 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 KLHDC3Q9BQ90 382 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 SIKE1Q9BRV8 207 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 SRXN1Q9BYN0 137 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 QRSL1Q9H0R6 528 aaKnown RBP8.55□□□□□ -1.04
CHD7-208ENST00000528280 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 PARPBPQ9NWS1 579 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 C6orf203Q9P0P8 240 aaPredicted RBP8.55□□□□□ -1.04
CHD7-208ENST00000528280 TMEM181Q9P2C4 612 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 TRIM33Q9UPN9 1127 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 CORO2BQ9UQ03 480 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 PLEKHA6Q9Y2H5 1048 aa8.55□□□□□ -1.04
CHD7-208ENST00000528280 A0A096LPI6 279 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 TMED7-TICAM2A0A0A6YYA0 188 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 PRAMEF27A3QJZ7 478 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 CDHR4A6H8M9 788 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 EVPLLA8MZ36 301 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 C5orf58C9J3I9 102 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 C9JVG2 144 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 SHOX2O60902 331 aaPredicted RBP8.54□□□□□ -1.04
CHD7-208ENST00000528280 CHRM4P08173 479 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 FOSL1P15407 271 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 RPS4Y1P22090 263 aaKnown RBP8.54□□□□□ -1.04
CHD7-208ENST00000528280 IL32P24001 234 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 CXCR1P25024 350 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 OR3A2P47893 321 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 AQP5P55064 265 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 FUT5Q11128 374 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 RGNQ15493 299 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 ACKR1Q16570 336 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 COX20Q5RI15 118 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 SHEQ5VZ18 495 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 METTL21CQ5VZV1 264 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 ANKRD34AQ69YU3 496 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 WBP2NLQ6ICG8 309 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 BLOC1S3Q6QNY0 202 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 TFAP2EQ6VUC0 442 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 Q6ZT83 130 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 MAVSQ7Z434 540 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 TGIF2LYQ8IUE0 185 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 ZNF100Q8IYN0 542 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 GABRG1Q8N1C3 465 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 BHLHE22Q8NFJ8 381 aaPredicted RBP8.54□□□□□ -1.04
CHD7-208ENST00000528280 PIGXQ8TBF5 258 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 PNPT1Q8TCS8 783 aaKnown RBP8.54□□□□□ -1.04
CHD7-208ENST00000528280 SLC38A5Q8WUX1 472 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 CNOT9Q92600 299 aaKnown RBP8.54□□□□□ -1.04
CHD7-208ENST00000528280 KISS1RQ969F8 398 aaPredicted RBP8.54□□□□□ -1.04
CHD7-208ENST00000528280 MUCL1Q96DR8 90 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 ZC3HAV1LQ96H79 300 aaKnown RBP8.54□□□□□ -1.04
CHD7-208ENST00000528280 MAGEB18Q96M61 343 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 MDFIQ99750 246 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 PSD2Q9BQI7 771 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 SPATA5L1Q9BVQ7 753 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 POTEKPQ9BYX7 375 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 ACTR6Q9GZN1 396 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 ADAM19Q9H013 955 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 LIME1Q9H400 295 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 PIF1Q9H611 641 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 COQ10BQ9H8M1 238 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 EVA1AQ9H8M9 152 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 BCL2L10Q9HD36 194 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 CTPS2Q9NRF8 586 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 TMED7Q9Y3B3 224 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 PCDHB14Q9Y5E9 798 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 GMEB1Q9Y692 573 aa8.54□□□□□ -1.04
CHD7-208ENST00000528280 IGKV3D-15A0A087WSY6 115 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 CENPVL1A0A0U1RR11 272 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 DEFB108AA8MXU0 73 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 SMAD9O15198 467 aaKnown RBP8.53□□□□□ -1.04
CHD7-208ENST00000528280 KLF4O43474 513 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 ADAP00813 363 aa8.53□□□□□ -1.04
CHD7-208ENST00000528280 GPIP06744 558 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms