RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 RAB38P57729 211 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 UFM1P61960 85 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 RPS15P62841 145 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 OLR1P78380 273 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 MAT1AQ00266 395 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 FAM27E3Q08E93 113 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 ZNF763Q0D2J5 394 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 BIKQ13323 160 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 SQLEQ14534 574 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 SYT16Q17RD7 645 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 NKAIN1Q4KMZ8 207 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 AGKQ53H12 422 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 VWA2Q5GFL6 755 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CPTPQ5TA50 214 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 NDUFAF5Q5TEU4 345 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 C18orf63Q68DL7 685 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 FAM71E1Q6IPT2 247 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 C8orf82Q6P1X6 216 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 FAM199XQ6PEV8 388 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 IKBIPQ70UQ0 350 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 PRSS41Q7RTY9 318 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 TIPARPQ7Z3E1 657 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 TAGAPQ8N103 731 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CA13Q8N1Q1 262 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CPSF7Q8N684 471 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 NATD1Q8N6N6 113 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CLEC18CQ8NCF0 446 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 TNIP2Q8NFZ5 429 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 OR4K14Q8NGD5 310 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CLHC1Q8NHS4 586 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CDC26Q8NHZ8 85 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 STARD8Q92502 1023 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 TANKQ92844 425 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 UCN3Q969E3 161 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 MTERF3Q96E29 417 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 MED30Q96HR3 178 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 TSSK3Q96PN8 268 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 GBP5Q96PP8 586 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 ZBTB18Q99592 522 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 MAPKAP1Q9BPZ7 522 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 SPRY4Q9C004 299 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 MMADHCQ9H3L0 296 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 REEP4Q9H6H4 257 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 RPF2Q9H7B2 306 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 AKIRIN1Q9H9L7 192 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 MYNNQ9NPC7 610 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 MKKSQ9NPJ1 570 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 MIEF1Q9NQG6 463 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 SAR1AQ9NR31 198 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 PRTFDC1Q9NRG1 225 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 SDR39U1Q9NRG7 319 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 AIG1Q9NVV5 245 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 ANKRD10Q9NXR5 420 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CCDC167Q9P0B6 97 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 HCN3Q9P1Z3 774 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 TRPC4Q9UBN4 977 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 DNAJB9Q9UBS3 223 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 ZNF282Q9UDV7 671 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 HSF4Q9ULV5 492 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 FARSAQ9Y285 508 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 MRPS33Q9Y291 106 aaKnown RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 TMEM184BQ9Y519 407 aaPredicted RBP4.1□□□□□ -1.75
USP48-211ENST00000526044 MYO15AQ9UKN7 3530 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 CACNA1HO95180 2353 aa4.1□□□□□ -1.75
USP48-211ENST00000526044 DMDP11532 3685 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 FRYLO94915 3013 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 GPR179Q6PRD1 2367 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 IGHV4-28A0A0C4DH34 117 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 LOC100653049A0A140TA62 436 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 GLOD5A6NK44 160 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 VSTM2BA6NLU5 285 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 WASHC1A8K0Z3 465 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 CDRT15L2A8MXV6 281 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 C9J4A7 227 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 H0YAE9 185 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ANKRD28O15084 1053 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 SLC22A2O15244 555 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TXNL1O43396 289 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 RAD1O60671 282 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TBX19O60806 448 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 SMPD2O60906 423 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TSPAN9O75954 239 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 KRT34O76011 436 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TPPPO94811 219 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 GPR75O95800 540 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 IGHEP01854 428 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 IL6P05231 212 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 HEXBP07686 556 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 FHP07954 510 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 RAB40ALP0C0E4 278 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 COX7A2P14406 83 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 TNNI3P19429 210 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 CSNK2A2P19784 350 aaPredicted RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 ITGAXP20702 1163 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 JAK1P23458 1154 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 MAPK3P27361 379 aaPredicted RBP4.09□□□□□ -1.75
USP48-211ENST00000526044 PPP2R1BP30154 601 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 MPIP34949 423 aa4.09□□□□□ -1.75
USP48-211ENST00000526044 ARL3P36405 182 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms