RNA–Protein interactions for RNA: ENST00000524475.1

SF3B2-202, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 432 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-202ENST00000524475 CMTM6Q9NX76 183 aa13.55□□□□□ -0.24
SF3B2-202ENST00000524475 TESQ9UGI8 421 aaKnown RBP13.55□□□□□ -0.24
SF3B2-202ENST00000524475 OSGIN1Q9UJX0 560 aa13.55□□□□□ -0.24
SF3B2-202ENST00000524475 HDGFL3Q9Y3E1 203 aa13.55□□□□□ -0.24
SF3B2-202ENST00000524475 HCFC1P51610 2035 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 TMED7-TICAM2A0A0A6YYA0 188 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 A1L4Q6 167 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 M0QX08 132 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 CXCL13O43927 109 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 TPST1O60507 370 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 FMO6PO60774 539 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 SYNGR4O95473 234 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 PRG2P13727 222 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 TACR3P29371 465 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 CRYBA2P53672 197 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 ZNF239Q16600 458 aaKnown RBP13.54□□□□□ -0.24
SF3B2-202ENST00000524475 TMPPEQ6ZT21 453 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 COMTD1Q86VU5 262 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 LIX1LQ8IVB5 337 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 RNF128Q8TEB7 428 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 TAMM41Q96BW9 452 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 ARHGDIGQ99819 225 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 PIGMQ9H3S5 423 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 JKAMPQ9P055 326 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 TAGLN3Q9UI15 199 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 SLC13A4Q9UKG4 626 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 TMED7Q9Y3B3 224 aa13.54□□□□□ -0.24
SF3B2-202ENST00000524475 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
SF3B2-202ENST00000524475 CELSR2Q9HCU4 2923 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 A0A1W2PNV4 684 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 ELOVL7A1L3X0 281 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 PRSS44E7EML9 344 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 NME4O00746 187 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 TNFSF13O75888 250 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 PMS2P2O95744 297 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 IFNA14P01570 189 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 IGFBP2P18065 325 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 CD247P20963 164 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 PCYT1AP49585 367 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 ASCL1P50553 236 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 MNAT1P51948 309 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 SLC7A2P52569 658 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 RGS8P57771 180 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-202ENST00000524475 CSNK2A1P68400 391 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-202ENST00000524475 NRF1Q16656 503 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 DUSP7Q16829 419 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 GLIPR1L2Q4G1C9 344 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 GTF2IRD2BQ6EKJ0 949 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 ATG4DQ86TL0 474 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-202ENST00000524475 GTF2IRD2Q86UP8 949 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 MICU2Q8IYU8 434 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 SLC43A2Q8N370 569 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 FITM2Q8N6M3 262 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 RELL2Q8NC24 303 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-202ENST00000524475 GPR32P1Q8NGA4 272 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 C3orf49Q96BT1 292 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 DDIT4LQ96D03 193 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 GMPPAQ96IJ6 420 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-202ENST00000524475 ZNF559Q9BR84 538 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 POTEKPQ9BYX7 375 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 TRIM2Q9C040 744 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 SPAG4Q9NPE6 437 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 TMEM181Q9P2C4 612 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 FOXD3Q9UJU5 478 aaPredicted RBP13.53□□□□□ -0.24
SF3B2-202ENST00000524475 TRAPPC4Q9Y296 219 aa13.53□□□□□ -0.24
SF3B2-202ENST00000524475 MPDZO75970 2070 aa13.52□□□□□ -0.24
SF3B2-202ENST00000524475 CCT8L1PA6NM43 557 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 FAM90A27PA6NNH2 459 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 TMEM229AB2RXF0 380 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 FRS3O43559 492 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 SS18L1O75177 396 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-202ENST00000524475 AQP8O94778 261 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 OPN1LWP04000 364 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 BMP5P22003 454 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 PSME3P61289 254 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 LIPEQ05469 1076 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 FOXF2Q12947 444 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 RNPS1Q15287 305 aaKnown RBP13.52□□□□□ -0.25
SF3B2-202ENST00000524475 SWT1Q5T5J6 900 aaKnown RBP13.52□□□□□ -0.25
SF3B2-202ENST00000524475 RANBP3LQ86VV4 465 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-202ENST00000524475 CADM2Q8N3J6 435 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 SMYD1Q8NB12 490 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 DNAJA4Q8WW22 397 aaPredicted RBP13.52□□□□□ -0.25
SF3B2-202ENST00000524475 INTS12Q96CB8 462 aaKnown RBP13.52□□□□□ -0.25
SF3B2-202ENST00000524475 OR5B2Q96R09 309 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 SRXN1Q9BYN0 137 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 ENKD1Q9H0I2 346 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 PCDHAC1Q9H158 963 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 ALG2Q9H553 416 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 PIF1Q9H611 641 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 NDE1Q9NXR1 346 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 BAG5Q9UL15 447 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 PKDREJQ9NTG1 2253 aa13.52□□□□□ -0.25
SF3B2-202ENST00000524475 A0A1W2PNR3 127 aa13.51□□□□□ -0.25
SF3B2-202ENST00000524475 TMEM72A0PK05 275 aa13.51□□□□□ -0.25
SF3B2-202ENST00000524475 A8MVM7 634 aa13.51□□□□□ -0.25
SF3B2-202ENST00000524475 MSTNO14793 375 aa13.51□□□□□ -0.25
SF3B2-202ENST00000524475 FZD7O75084 574 aa13.51□□□□□ -0.25
SF3B2-202ENST00000524475 NPIPB7O75200 414 aa13.51□□□□□ -0.25
SF3B2-202ENST00000524475 FESP07332 822 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms