RNA–Protein interactions for RNA: ENST00000523950.5

VEGFA-225, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 954 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-225ENST00000523950 ADAM19Q9H013 955 aa11.26□□□□□ -0.61
VEGFA-225ENST00000523950 COQ10BQ9H8M1 238 aa11.26□□□□□ -0.61
VEGFA-225ENST00000523950 C12orf10Q9HB07 376 aa11.26□□□□□ -0.61
VEGFA-225ENST00000523950 SLC24A3Q9HC58 644 aa11.26□□□□□ -0.61
VEGFA-225ENST00000523950 GP6Q9HCN6 339 aa11.26□□□□□ -0.61
VEGFA-225ENST00000523950 CTPS2Q9NRF8 586 aa11.26□□□□□ -0.61
VEGFA-225ENST00000523950 TESQ9UGI8 421 aaKnown RBP11.26□□□□□ -0.61
VEGFA-225ENST00000523950 TMED7-TICAM2A0A0A6YYA0 188 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 A0A1W2PNV4 684 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 M0QX08 132 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 GKN3PP0CG01 181 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 TACR3P29371 465 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 AQP1P29972 269 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 NCALDP61601 193 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 RNPS1Q15287 305 aaKnown RBP11.25□□□□□ -0.61
VEGFA-225ENST00000523950 SP5Q6BEB4 398 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-225ENST00000523950 C8orf82Q6P1X6 216 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-225ENST00000523950 TMPPEQ6ZT21 453 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 ADGRG3Q86Y34 549 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 SLC43A2Q8N370 569 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 LSMEM1Q8N8F7 131 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 ATP6V1C2Q8NEY4 427 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 RNF128Q8TEB7 428 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 INTS12Q96CB8 462 aaKnown RBP11.25□□□□□ -0.61
VEGFA-225ENST00000523950 DDIT4LQ96D03 193 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 ZHX1-C8orf76Q96EF9 292 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 ZNF583Q96ND8 569 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 OR5B2Q96R09 309 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 SPOCK3Q9BQ16 436 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 TACO1Q9BSH4 297 aaKnown RBP11.25□□□□□ -0.61
VEGFA-225ENST00000523950 UCK2Q9BZX2 261 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 ENKD1Q9H0I2 346 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 JKAMPQ9P055 326 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 OSGIN1Q9UJX0 560 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 PACSIN3Q9UKS6 424 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 TMED7Q9Y3B3 224 aa11.25□□□□□ -0.61
VEGFA-225ENST00000523950 INTS1Q8N201 2190 aaKnown RBP11.25□□□□□ -0.61
VEGFA-225ENST00000523950 SPTBN1Q01082 2364 aaKnown RBP11.25□□□□□ -0.61
VEGFA-225ENST00000523950 PTPN13Q12923 2485 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 NKX2-6A6NCS4 301 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 MSTNO14793 375 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 HNRNPRO43390 633 aaKnown RBP11.24□□□□□ -0.61
VEGFA-225ENST00000523950 SS18L1O75177 396 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-225ENST00000523950 TNFSF13O75888 250 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 PMS2P2O95744 297 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 IFNA14P01570 189 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 OPN1LWP04000 364 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 TFPIP10646 304 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 IGFBP2P18065 325 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 GRNP28799 593 aaKnown RBP11.24□□□□□ -0.61
VEGFA-225ENST00000523950 KCNJ5P48544 419 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 PCYT1AP49585 367 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 NUDT2P50583 147 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 RGS8P57771 180 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-225ENST00000523950 FOXF2Q12947 444 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 GUSBP1Q15486 140 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 FAM214BQ7L5A3 538 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 RANBP3LQ86VV4 465 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-225ENST00000523950 MCEMP1Q8IX19 187 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 GCNT2Q8N0V5 402 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 CADM2Q8N3J6 435 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 OR2T12Q8NG77 320 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 SLC26A7Q8TE54 656 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 RNASE6Q93091 150 aaKnown RBP11.24□□□□□ -0.61
VEGFA-225ENST00000523950 ZNF559Q9BR84 538 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 TRIM2Q9C040 744 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 TRAPPC4Q9Y296 219 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 EMC9Q9Y3B6 208 aa11.24□□□□□ -0.61
VEGFA-225ENST00000523950 USP9YO00507 2555 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-225ENST00000523950 A0A1W2PNR3 127 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 ELOVL7A1L3X0 281 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 H0YHG0 523 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 SULT2B1O00204 365 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 TPST1O60507 370 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 FMO6PO60774 539 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 GCM2O75603 506 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-225ENST00000523950 AQP8O94778 261 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 LGI1O95970 557 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 PLGP00747 810 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-225ENST00000523950 CD8BP10966 210 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 PRG2P13727 222 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 COX6B1P14854 86 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 ENPP1P22413 925 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 CXCR1P25024 350 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 DIO1P49895 249 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 CTBP2P56545 445 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 PPP4R4Q6NUP7 873 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 C5orf46Q6UWT4 87 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 PLXDC2Q6UX71 529 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 FCRLAQ7L513 359 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 SLC15A3Q8IY34 581 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 MICU2Q8IYU8 434 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 OR52E4Q8NGH9 312 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 OR6K3Q8NGY3 331 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 DNAJA4Q8WW22 397 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-225ENST00000523950 C3orf49Q96BT1 292 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 ARHGDIGQ99819 225 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 SRXN1Q9BYN0 137 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 POTEKPQ9BYX7 375 aa11.23□□□□□ -0.61
VEGFA-225ENST00000523950 PIF1Q9H611 641 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms