RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 SLC19A2O60779 497 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 HSBP1O75506 76 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 AP2A2O94973 939 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 ANGPTL1O95841 491 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 FADS2O95864 444 aaKnown RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 NGFRP08138 427 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 RD3LP0DJH9 198 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NPR2P20594 1047 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 ATP5A1P25705 553 aaKnown RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 TEAD1P28347 426 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 AQP2P41181 271 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NSG1P42857 185 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 XGP55808 180 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 UBE2MP61081 183 aaKnown RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 IL9RQ01113 521 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 SRSF9Q13242 221 aaKnown RBP eCLIP3.48□□□□□ -1.85
SKP1-209ENST00000522552 RIGQ13278 110 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 SERTAD2Q14140 314 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 TRAM2Q15035 370 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 TMEM31Q5JXX7 168 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 UTF1Q5T230 341 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 SUMO4Q6EEV6 95 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 FAM151BQ6UXP7 276 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 PLEKHG7Q6ZR37 379 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 FAM89BQ8N5H3 189 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 RBMXL3Q8N7X1 1067 aaKnown RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 TTC29Q8NA56 475 aaPredicted RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 CATSPER1Q8NEC5 780 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 OR56A4Q8NGH8 313 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 FBXO25Q8TCJ0 367 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 AENQ8WTP8 325 aaKnown RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 EXTL1Q92935 676 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 ISOC2Q96AB3 205 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 APH1AQ96BI3 265 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 CCDC127Q96BQ5 260 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NTNG2Q96CW9 530 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 CXorf40BQ96DE9 158 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NSL1Q96IY1 281 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 C9orf72Q96LT7 481 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 CLCC1Q96S66 551 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 ECSITQ9BQ95 431 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 GLIPR2Q9H4G4 154 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 NIPAL2Q9H841 368 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 CUTCQ9NTM9 273 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 IMP3Q9NV31 184 aaKnown RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 NXT1Q9UKK6 140 aaKnown RBP3.48□□□□□ -1.85
SKP1-209ENST00000522552 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.48□□□□□ -1.85
SKP1-209ENST00000522552 DHRS7Q9Y394 339 aa3.48□□□□□ -1.85
SKP1-209ENST00000522552 LRPPRCP42704 1394 aaKnown RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 TMEM272A0A1B0GTI8 110 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 OR5H15A6NDH6 313 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 GPR171O14626 319 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 TFECO14948 347 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 FZD7O75084 574 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 CNOT3O75175 753 aaKnown RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 SC5DO75845 299 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 CDK2AP2O75956 126 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 BAG4O95429 457 aaKnown RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 C1orf105O95561 183 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 LINC00271P0C7V0 271 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 OCMP0CE72 109 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 TRIM49P0CI25 452 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 TRIM49CP0CI26 452 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 FGF3P11487 239 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 BCKDHAP12694 445 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 HLA-DOBP13765 273 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 GATA1P15976 413 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 DPEP1P16444 411 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 BGNP21810 368 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 HTR2CP28335 458 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 IFNA8P32881 189 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 UGT1A3P35503 534 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 UGT2B10P36537 528 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 RPL4P36578 427 aaKnown RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 MAP3K8P41279 467 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 AMTP48728 403 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 TMED10P49755 219 aaKnown RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 GPX6P59796 221 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 EEF1A1P68104 462 aaKnown RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 ID2Q02363 134 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 RAB40BQ12829 278 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 SLC17A1Q14916 467 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 ODF3L2Q3SX64 289 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 GTDC1Q4AE62 458 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 RFTN2Q52LD8 501 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 CYBRD1Q53TN4 286 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 ATP1A1-AS1Q5TC04 95 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 EEF1A1P5Q5VTE0 462 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 OTUD1Q5VV17 481 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 ZNF585AQ6P3V2 769 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 RFWD3Q6PCD5 774 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 TMPRSS11AQ6ZMR5 421 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 ZNF621Q6ZSS3 439 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 BOD1L2Q8IYS8 172 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 OR2L13Q8N349 312 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 MS4A15Q8N5U1 240 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 ZSCAN4Q8NAM6 433 aaPredicted RBP3.47□□□□□ -1.85
SKP1-209ENST00000522552 SMRP1Q8NCR6 262 aa3.47□□□□□ -1.85
SKP1-209ENST00000522552 TMEM239Q8WW34 195 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms