RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 C10orf111Q8N326 155 aa10.89□□□□□ -0.67
SYNPO-204ENST00000519664 HHATLQ9HCP6 504 aa10.89□□□□□ -0.67
SYNPO-204ENST00000519664 ZNF701Q9NV72 531 aaPredicted RBP10.89□□□□□ -0.67
SYNPO-204ENST00000519664 KLHL9Q9P2J3 617 aa10.89□□□□□ -0.67
SYNPO-204ENST00000519664 CREBL2O60519 120 aaPredicted RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 VNN2O95498 520 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ETV5P41161 510 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 AQP2P41181 271 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 RPS5P46782 204 aaKnown RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 PCGF3Q3KNV8 242 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ABCA11PQ4W5N1 156 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 PRSS36Q5K4E3 855 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 PXDC1Q5TGL8 231 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 FAM205BPQ63HN1 556 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 OR7E24Q6IFN5 339 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ADAMTSL4Q6UY14 1074 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 MAMDC2Q7Z304 686 aaPredicted RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 BPHLQ86WA6 291 aaPredicted RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 FBXL6Q8N531 539 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ANGPTL6Q8NI99 470 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ZFC3H1O60293 1989 aaKnown RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 NCOR1O75376 2440 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 A0A1B0GWA3 101 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ARPC1BO15143 372 aaKnown RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 CSNK1EP49674 416 aaKnown RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 HCCSP53701 268 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 TNFRSF17Q02223 184 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 SELENBP1Q13228 472 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 PDE7AQ13946 482 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 PLK5Q496M5 336 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 OTPQ5XKR4 325 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 FCRLAQ7L513 359 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 MFSD9Q8NBP5 474 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 OR13H1Q8NG92 308 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 C15orf40Q8WUR7 153 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ELF4Q99607 663 aaPredicted RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 LPAR4Q99677 370 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 MAP3K3Q99759 626 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 CHST8Q9H2A9 424 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ANKRD61A6NGH8 418 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 KDM4EB2RXH2 506 aaPredicted RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ARPC5O15511 151 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 AMY2AP04746 511 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 DRD1P21728 446 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ZP2Q05996 745 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 MFSD12Q6NUT3 480 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 HAGHLQ6PII5 290 aaPredicted RBP10.88□□□□□ -0.67
SYNPO-204ENST00000519664 TBC1D20Q96BZ9 403 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 HOXD1Q9GZZ0 328 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 GLTPQ9NZD2 209 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 ADAM29Q9UKF5 820 aa10.88□□□□□ -0.67
SYNPO-204ENST00000519664 EEF1E1-BLOC1S5C9J1V9 151 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 RFPL3O75679 317 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 AKR1C4P17516 323 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 SNU13P55769 128 aaKnown RBP10.87□□□□□ -0.67
SYNPO-204ENST00000519664 P2RX3P56373 397 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 TMEM240Q5SV17 173 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 RAET1LQ5VY80 246 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 RAB12Q6IQ22 244 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 OR13C3Q8NGS6 347 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 PFN4Q8NHR9 129 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 ZNF775Q96BV0 537 aaPredicted RBP10.87□□□□□ -0.67
SYNPO-204ENST00000519664 SLC25A44Q96H78 314 aaPredicted RBP10.87□□□□□ -0.67
SYNPO-204ENST00000519664 C11orf54Q9H0W9 315 aaPredicted RBP10.87□□□□□ -0.67
SYNPO-204ENST00000519664 XIRP1Q702N8 1843 aaKnown RBP10.87□□□□□ -0.67
SYNPO-204ENST00000519664 VSTM2BA6NLU5 285 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 F5H0A9 414 aaPredicted RBP10.87□□□□□ -0.67
SYNPO-204ENST00000519664 SMLR1H3BR10 107 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 LRRTM2O43300 516 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 GATBO75879 557 aaKnown RBP10.87□□□□□ -0.67
SYNPO-204ENST00000519664 APBB3O95704 486 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 SFTPBP07988 381 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 CHRM4P08173 479 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 UBL4AP11441 157 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 CDKN3Q16667 212 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 TMEM17Q86X19 198 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 PLXDC1Q8IUK5 500 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 KDM8Q8N371 416 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 OR5T2Q8NGG2 359 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 TM9SF4Q92544 642 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 NXPE2Q96DL1 559 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 HIST1H2AAQ96QV6 131 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 PDCD1LG2Q9BQ51 273 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 NUDT22Q9BRQ3 303 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 BTBD2Q9BX70 525 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 SGPP1Q9BX95 441 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 CBLCQ9ULV8 474 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 CACNG2Q9Y698 323 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 CXCL10P02778 98 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 MAOAP21397 527 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 HOXC8P31273 242 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 EVI2BP34910 448 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 NUDT1P36639 197 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 PBX2P40425 430 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 TLE3Q04726 772 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 SPIN3Q5JUX0 258 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 TMEM150AQ86TG1 271 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 AMER3Q8N944 861 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 ANKRD53Q8N9V6 530 aa10.87□□□□□ -0.67
SYNPO-204ENST00000519664 OR52A5Q9H2C5 316 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms