RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 EVX1P49640 407 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 AP1S2P56377 157 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 TEKQ02763 1124 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 TGM3Q08188 693 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 SNTB2Q13425 540 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 KCTD19Q17RG1 926 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 SPRNQ5BIV9 151 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 OTUD3Q5T2D3 398 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 PDSS1Q5T2R2 415 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 ABLIM2Q6H8Q1 611 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 KRT80Q6KB66 452 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 DUX4L9Q6RFH8 374 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 PPP1R21Q6ZMI0 780 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 USP51Q70EK9 711 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 SLC44A2Q8IWA5 706 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 RHOT2Q8IXI1 618 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 GPATCH11Q8N954 259 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 PAPD5Q8NDF8 572 aaKnown RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 ATP6V1C2Q8NEY4 427 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 WIPF2Q8TF74 440 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 APH1AQ96BI3 265 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 BOD1Q96IK1 185 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 FAM71F1Q96KD3 344 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 GBP4Q96PP9 640 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 CITED2Q99967 270 aaPredicted RBP5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 RHOXF2Q9BQY4 288 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 MS4A5Q9H3V2 200 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 INPP5EQ9NRR6 644 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 LRP1BQ9NZR2 4599 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 DUX4Q9UBX2 424 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 PHF11Q9UIL8 331 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 DNAH6Q9C0G6 4158 aa5.61□□□□□ -1.51
CTNNA1-216ENST00000519489 A0A087WZY1 265 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 MACROD2A1Z1Q3 448 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ZNF195O14628 629 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 TAPBPO15533 448 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 PSMD3O43242 534 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 H2AFZP0C0S5 128 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 HIST1H2AGP0C0S8 130 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 FAM58BPP0C7Q3 252 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 PORP16435 677 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 GNAZP19086 355 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 HIST1H2ADP20671 130 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 GABRA5P31644 462 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 GPX6P59796 221 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 RAC3P60763 192 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 PSG6Q00889 435 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 BST1Q10588 318 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 IQCB1Q15051 598 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 TRADDQ15628 312 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 TOMM34Q15785 309 aaPredicted RBP5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 TBRG1Q3YBR2 411 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ATP6AP1LQ52LC2 224 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 TMEM35AQ53FP2 167 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 RBM20Q5T481 1227 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 H2AFVQ71UI9 128 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 GSPT2Q8IYD1 628 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 KATNAL2Q8IYT4 538 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 KRT78Q8N1N4 520 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 MYO1HQ8N1T3 1032 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 CDYL2Q8N8U2 506 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 GATSQ8NAP1 163 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 OR4F17Q8NGA8 305 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 OR4K14Q8NGD5 310 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ZFP90Q8TF47 636 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 LINC00476Q8WZB0 136 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ALG3Q92685 438 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ESAMQ96AP7 390 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 LRRC45Q96CN5 670 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ZG16BQ96DA0 208 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 WDR34Q96EX3 536 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ITCHQ96J02 903 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 HIST1H2AHQ96KK5 128 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 TSPAN32Q96QS1 320 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 OR4F4Q96R69 305 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 HIST1H2AJQ99878 128 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 KCNS3Q9BQ31 491 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 H2AFJQ9BTM1 129 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 KIFC1Q9BW19 673 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 NOX3Q9HBY0 568 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 INTS10Q9NVR2 710 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 ABCG2Q9UNQ0 655 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 CFL2Q9Y281 166 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 NOSIPQ9Y314 301 aaKnown RBP5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 CMAHPQ9Y471 501 aa5.6□□□□□ -1.51
CTNNA1-216ENST00000519489 IGHV1-69-2A0A0G2JMI3 117 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 A0A0U1RQK1 487 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 A8MXK9 166 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 F5H0A9 414 aaPredicted RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 ERAL1O75616 437 aaKnown RBP5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 WDR47O94967 919 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 IGKV3-15P01624 115 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 ATP1B1P05026 303 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 ETS1P14921 441 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 RAC2P15153 192 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 MAKP20794 623 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 ME2P23368 584 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 PIK3R1P27986 724 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 GABRB3P28472 473 aa5.59□□□□□ -1.51
CTNNA1-216ENST00000519489 SLC1A2P43004 574 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms