RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 PAMR1Q6UXH9 720 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 ZNF836Q6ZNA1 936 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 BEND4Q6ZU67 534 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 NUFIP2Q7Z417 695 aaKnown RBP5.8□□□□□ -1.48
KDM3B-208ENST00000512928 GRINAQ7Z429 371 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 LSRQ86X29 649 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-208ENST00000512928 VRK2Q86Y07 508 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 CMIPQ8IY22 773 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 ZNF100Q8IYN0 542 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 UBE2J2Q8N2K1 259 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 SLC25A43Q8WUT9 341 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-208ENST00000512928 SLC38A5Q8WUX1 472 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 OIT3Q8WWZ8 545 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 MAL2Q969L2 176 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 SPDL1Q96EA4 605 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 ZHX1-C8orf76Q96EF9 292 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 TMEM19Q96HH6 336 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 OR11A1Q9GZK7 315 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 ACTR6Q9GZN1 396 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 SAP130Q9H0E3 1048 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 RAD21L1Q9H4I0 556 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 EXOSC3Q9NQT5 275 aaKnown RBP5.8□□□□□ -1.48
KDM3B-208ENST00000512928 SAR1AQ9NR31 198 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 PLSCR4Q9NRQ2 329 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 ACER3Q9NUN7 267 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 MRGBPQ9NV56 204 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 RLIMQ9NVW2 624 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 CALML5Q9NZT1 146 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 KLHL9Q9P2J3 617 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 CHRNA9Q9UGM1 479 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 ZNF443Q9Y2A4 671 aaPredicted RBP5.8□□□□□ -1.48
KDM3B-208ENST00000512928 PCDHB14Q9Y5E9 798 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 CCDC168Q8NDH2 2452 aa5.8□□□□□ -1.48
KDM3B-208ENST00000512928 A0A096LPI6 279 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TMED7-TICAM2A0A0A6YYA0 188 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 FXYD1O00168 92 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 ANGPT2O15123 496 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 FAM107AO95990 144 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 IGHV3-9P01782 118 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 YES1P07947 543 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 GUSBP08236 651 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TFPTP0C1Z6 253 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 ZCCHC18P0CG32 403 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TROVE2P10155 538 aaKnown RBP eCLIP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 NID1P14543 1247 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 CXCR1P25024 350 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TACR3P29371 465 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 MAGEA8P43361 318 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 HTR3AP46098 478 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 POLR2HP52434 150 aaKnown RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 RAC3P60763 192 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 GNGT1P63211 74 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 SQLEQ14534 574 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 GUSBP1Q15486 140 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 RGNQ15493 299 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TESK1Q15569 626 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 STK11Q15831 433 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 ZNF311Q5JNZ3 666 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TMPPEQ6ZT21 453 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 SPATA21Q7Z572 469 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 CXorf67Q86X51 503 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 MSRB3Q8IXL7 192 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 SLC43A2Q8N370 569 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 DPP10Q8N608 796 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 FAM71CQ8NEG0 241 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 NFKBIDQ8NI38 313 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 RNF217Q8TC41 542 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 GTF2H4Q92759 462 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 NINJ1Q92982 152 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 KISS1RQ969F8 398 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 RNF166Q96A37 237 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 S100PBPQ96BU1 408 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 DDIT4LQ96D03 193 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 POM121Q96HA1 1249 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 ZNF300Q96RE9 604 aaPredicted RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TACO1Q9BSH4 297 aaKnown RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 CCDC106Q9BWC9 280 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 PAIP1Q9H074 479 aaKnown RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 ARMC7Q9H6L4 198 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 THUMPD1Q9NXG2 353 aaKnown RBP5.79□□□□□ -1.48
KDM3B-208ENST00000512928 EMC3Q9P0I2 261 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 SLAMF8Q9P0V8 285 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 ZNF232Q9UNY5 417 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TRIM33Q9UPN9 1127 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 TMED7Q9Y3B3 224 aa5.79□□□□□ -1.48
KDM3B-208ENST00000512928 MED12LQ86YW9 2145 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 MAP1AP78559 2803 aaPredicted RBP5.78□□□□□ -1.48
KDM3B-208ENST00000512928 A0A0G2JPF8 293 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 TMEM72A0PK05 275 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 FAM221AA4D161 298 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 CDHR4A6H8M9 788 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 EVPLLA8MZ36 301 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 HNRNPCL2B2RXH8 293 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 HNRNPCL3B7ZW38 293 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 ETV2O00321 342 aaPredicted RBP5.78□□□□□ -1.48
KDM3B-208ENST00000512928 CLOCKO15516 846 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 FRS3O43559 492 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 CYTIPO60759 359 aa5.78□□□□□ -1.48
KDM3B-208ENST00000512928 HNRNPCL1O60812 293 aaKnown RBP5.78□□□□□ -1.48
KDM3B-208ENST00000512928 DNAJA2O60884 412 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms