RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 hCG_38984A0A1B0GV85 526 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 C13orf42A0A1B0GVH6 325 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 MAGEB16A2A368 324 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 A8MXQ7 604 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF732B4DXR9 585 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 RNF103O00237 685 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TTI1O43156 1089 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CRCPO75575 148 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 GRAP2O75791 330 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 GLCEO94923 617 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 NELFEP18615 380 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 MAGEB1P43366 347 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ZFP36L2P47974 494 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ACOT2P49753 483 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 GFERP55789 205 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ATP5J2P56134 94 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TMEM50BP56557 158 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 MAP3K7CLP57077 242 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC34A1Q06495 639 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 C17orf67Q0P5P2 114 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CALCOCO2Q13137 446 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 FASTKD3Q14CZ7 662 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 KLHL40Q2TBA0 621 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 MOGAT2Q3SYC2 334 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 LRRC37A5PQ49AS3 106 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 LRRC38Q5VT99 294 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC27A4Q6P1M0 643 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ALKBH5Q6P6C2 394 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CNSTQ6PJW8 725 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CWC27Q6UX04 472 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 STXBP4Q6ZWJ1 553 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 KRTAP5-2Q701N4 177 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ZER1Q7Z7L7 766 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC13A5Q86YT5 568 aaPredicted RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF440Q8IYI8 595 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 SIDT2Q8NBJ9 832 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TMEM161BQ8NDZ6 487 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 OR2A12Q8NGT7 310 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 C11orf45Q8TAV5 145 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC22A8Q8TCC7 542 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC37A2Q8TED4 501 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 RXFP2Q8WXD0 754 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 MRPL24Q96A35 216 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CNRIP1Q96F85 164 aaPredicted RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 HPDLQ96IR7 371 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF514Q96K75 400 aaPredicted RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 PRICKLE1Q96MT3 831 aaPredicted RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TGM7Q96PF1 710 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 PANX3Q96QZ0 392 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 MRPL45Q9BRJ2 306 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TRIM51Q9BSJ1 452 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 PAPOLGQ9BWT3 736 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CACNG6Q9BXT2 260 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ACPTQ9BZG2 426 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TRIM15Q9C019 465 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 SLC39A8Q9C0K1 460 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 CSNK1G1Q9HCP0 422 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 NDE1Q9NXR1 346 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 VPS54Q9P1Q0 977 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TMCC3Q9ULS5 477 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ITM2BQ9Y287 266 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 MRPS2Q9Y399 296 aaKnown RBP2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 TMED7Q9Y3B3 224 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 ARID1AO14497 2285 aa2.9□□□□□ -1.95
TOPBP1-208ENST00000511439 A0A087X0K7 114 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 A0A0J9YWU9 116 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 A0A1W2PPR1 153 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 G3V2L1 256 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 SOCS3O14543 225 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 CPLX1O14810 134 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 IDH3BO43837 385 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 VEGFDO43915 354 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 CLN5O75503 358 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 LETM1O95202 739 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 PIGRP01833 764 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 PCCBP05166 539 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 CAPN1P07384 714 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 UQCRHP07919 91 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 CCDC166P0CW27 439 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 UROSP10746 265 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF30P17039 623 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 DESP17661 470 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 VCLP18206 1134 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 C4BPBP20851 252 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 IGFBP5P24593 272 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 CTNNA2P26232 953 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 AK4P27144 223 aaPredicted RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 PDHA2P29803 388 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 SERPINB6P35237 376 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 FEN1P39748 380 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 NUMBP49757 651 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 ZNF131P52739 623 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 NUP107P57740 925 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 BTG1P62324 171 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 RPS24P62847 133 aaKnown RBP2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 DHODHQ02127 395 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 AP1B1Q10567 949 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 RCN2Q14257 317 aa2.89□□□□□ -1.95
TOPBP1-208ENST00000511439 FAM189A2Q15884 450 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms