RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 HSP90B2PQ58FF3 399 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 SYT14P1Q58G82 188 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 C3orf33Q6P1S2 294 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 NUFIP2Q7Z417 695 aaKnown RBP14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 SLC25A43Q8WUT9 341 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 ANKRD27Q96NW4 1050 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 TMEM38AQ9H6F2 299 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 NDRG3Q9UGV2 375 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 TRAPPC4Q9Y296 219 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF443Q9Y2A4 671 aaPredicted RBP14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 TMED7Q9Y3B3 224 aa14.38□□□□□ -0.11
PDLIM5-212ENST00000509333 PRR14LQ5THK1 2151 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 IGHV3-15A0A0B4J1V0 119 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 SULT2B1O00204 365 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF208O43345 1280 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 CYTIPO60759 359 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 TROVE2P10155 538 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 PRG2P13727 222 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 POU2F1P14859 743 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 CCNA2P20248 432 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 AGTR1P30556 359 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 MAP2K6P52564 334 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 SF3A3Q12874 501 aaKnown RBP eCLIP14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF311Q5JNZ3 666 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 GCNT6Q5T4J0 391 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 RNF220Q5VTB9 566 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 REEP3Q6NUK4 255 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF550Q7Z398 422 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 MTDHQ86UE4 582 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 BBS10Q8TAM1 723 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF317Q96PQ6 595 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 CGREF1Q99674 301 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 CPPED1Q9BRF8 314 aaPredicted RBP14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 GPATCH1Q9BRR8 931 aaKnown RBP14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 OR11A1Q9GZK7 315 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 BCO1Q9HAY6 547 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 SAR1AQ9NR31 198 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 HDGFL3Q9Y3E1 203 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 CSMD2Q7Z408 3487 aa14.37□□□□□ -0.11
PDLIM5-212ENST00000509333 TMEM72A0PK05 275 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 SH3D21A4FU49 640 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 C5orf58C9J3I9 102 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 FBP2O00757 339 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 ANGPT2O15123 496 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 SMAD9O15198 467 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 PMS2P2O95744 297 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 TFPIP10646 304 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 CPOXP36551 454 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 POLR2HP52434 150 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 CSNK2A1P68400 391 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 H3F3AP84243 136 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 RASGEF1BQ0VAM2 473 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 TMEM201Q5SNT2 666 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 TMEM200AQ86VY9 491 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 LSRQ86X29 649 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 NFKBIDQ8NI38 313 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 SLC35B4Q969S0 331 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF775Q96BV0 537 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 PSD2Q9BQI7 771 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 POLDIP3Q9BY77 421 aaKnown RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 ARMC7Q9H6L4 198 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 TMEM181Q9P2C4 612 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 KLHL13Q9P2N7 655 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 CORO2BQ9UQ03 480 aa14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 SPIN1Q9Y657 262 aaPredicted RBP14.36□□□□□ -0.11
PDLIM5-212ENST00000509333 CASKO14936 926 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 TPST1O60507 370 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 IMPDH2P12268 514 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 KCNJ5P48544 419 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 KLF10Q13118 480 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 SELPLGQ14242 412 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 PDK3Q15120 406 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 EXOC3L2Q2M3D2 409 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 ANKRD34AQ69YU3 496 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 WBP2NLQ6ICG8 309 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 STAC2Q6ZMT1 411 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 BEND4Q6ZU67 534 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 DHDDSQ86SQ9 333 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 SERPINA11Q86U17 422 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 CDC20BQ86Y33 519 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 PTOV1Q86YD1 416 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 LURAP1LQ8IV03 231 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 NRGNQ92686 78 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 POTEKPQ9BYX7 375 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 KLHL4Q9C0H6 718 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 CLEC4MQ9H2X3 399 aaPredicted RBP14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 LIME1Q9H400 295 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 C12orf49Q9H741 205 aa14.35□□□□□ -0.11
PDLIM5-212ENST00000509333 ZC3H12DA2A288 527 aaKnown RBP14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF724A8MTY0 619 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 ZNF814B7Z6K7 855 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 GCM2O75603 506 aaPredicted RBP14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 UQCRBP14927 111 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 SLC6A2P23975 617 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 CXCR1P25024 350 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 PRKAR1BP31321 381 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 NTF4P34130 210 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 GZMMP51124 257 aa14.34□□□□□ -0.11
PDLIM5-212ENST00000509333 COPZ1P61923 177 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms