RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 KRT14P02533 472 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 FGF4P08620 206 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 PABPC4LP0CB38 370 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 EIF2S2P20042 333 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 IDSP22304 550 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZBTB25P24278 435 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 LMO2P25791 158 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 PTBP1P26599 531 aaKnown RBP eCLIP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 HOXD10P28358 340 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 RPL34P49207 117 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 C21orf59P57076 290 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 RND3P61587 244 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 OC90Q02509 493 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC10A7Q0GE19 358 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF154Q13106 437 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 CAPRIN1Q14444 709 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 KCNJ11Q14654 390 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 LAGE3Q14657 143 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 ARHGAP19Q14CB8 494 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 MICAQ29983 383 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 LINC00242Q5T6M2 205 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 UQCC3Q6UW78 93 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 STAC2Q6ZMT1 411 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 BZW1Q7L1Q6 419 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 H2BFWTQ7Z2G1 175 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 DHDDSQ86SQ9 333 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 CSNK1A1LQ8N752 337 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 TRPV1Q8NER1 839 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 FNDC8Q8TC99 324 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 AGAP11Q8TF27 550 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 RAPGEF5Q92565 580 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 BADQ92934 168 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 STMN2Q93045 179 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 LINC00167Q96N53 147 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 FMO2Q99518 471 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 NAT10Q9H0A0 1025 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 IKZF5Q9H5V7 419 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF385DQ9H6B1 395 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 POPDC2Q9HBU9 364 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 CRLF2Q9HC73 371 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 AMBNQ9NP70 447 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 MEPEQ9NQ76 525 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 GLRX2Q9NS18 164 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF639Q9UID6 485 aa3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 AK6Q9Y3D8 172 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-209ENST00000508304 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 CCDC182A6NF36 153 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 RPL37AP8A6NKH3 93 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 CCT8L1PA6NM43 557 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF487B1APH4 448 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 DNALI1O14645 258 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 CACNG3O60359 315 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR10H3O60404 316 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 PFKFB2O60825 505 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 STAG3L3P0CL85 134 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 ETS2P15036 469 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF24P17028 368 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 FGF9P31371 208 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 FDFT1P37268 417 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 PKNOX1P55347 436 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 RIPK4P57078 832 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 VLDLRP98155 873 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 BST2Q10589 180 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 MERTKQ12866 999 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 C1orf61Q13536 156 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 HADHQ16836 314 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 VWA2Q5GFL6 755 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 XKR7Q5GH72 579 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 RNLSQ5VYX0 342 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 CCDC137Q6PK04 289 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 CCBE1Q6UXH8 406 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 LRRC31Q6UY01 552 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 LRRC74BQ6ZQY2 392 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 C19orf35Q6ZS72 473 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 OTUD6AQ7L8S5 288 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 TMCO2Q7Z6W1 182 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 EGFL6Q8IUX8 553 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC22A18ASQ8N1D0 253 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 GPR137CQ8N3F9 429 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF491Q8N8L2 437 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR6C4Q8NGE1 309 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR4D9Q8NGE8 314 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 OR4Q3Q8NH05 313 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 MAGEE2Q8TD90 523 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 SSC4DQ8WTU2 575 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 ST8SIA1Q92185 356 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 MRPS31Q92665 395 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 UBE2E3Q969T4 207 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 TMEM80Q96HE8 168 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 ZNF641Q96N77 438 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 SLC35A5Q9BS91 424 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 NIPSNAP3BQ9BS92 247 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 TRIM62Q9BVG3 475 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 PPDPFQ9H3Y8 114 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 CHRAC1Q9NRG0 131 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 PNO1Q9NRX1 252 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 PAK1IP1Q9NWT1 392 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 EHFQ9NZC4 300 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 SENP1Q9P0U3 644 aa3.17□□□□□ -1.9
TRAPPC13-209ENST00000508304 GCNT4Q9P109 453 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms