RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 FAM162AQ96A26 154 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 MCUR1Q96AQ8 359 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 TAMM41Q96BW9 452 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 OTUB1Q96FW1 271 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 ADGRG7Q96K78 797 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 PRRC1Q96M27 445 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 DMRTA2Q96SC8 542 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF426Q9BUY5 554 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 SF3B5Q9BWJ5 86 aaKnown RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 SFXN3Q9BWM7 321 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 DEFB127Q9H1M4 99 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 LRMDAQ9H2I8 198 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 PIGMQ9H3S5 423 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 KRCC1Q9NPI7 259 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 COQ3Q9NZJ6 369 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 MEMO1Q9Y316 297 aa7.63□□□□□ -1.19
PDGFC-205ENST00000506880 KLF2Q9Y5W3 355 aaPredicted RBP7.63□□□□□ -1.19
PDGFC-205ENST00000506880 ANKHD1Q8IWZ3 2542 aaKnown RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NPIPA5A0A0B4J1W7 369 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 A0A1W2PRQ8 180 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 ELOA3DA6NLF2 546 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 TMEM229AB2RXF0 380 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NPIPA2E9PIF3 369 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NPIPA7E9PJI5 369 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NPIPA3F8WFD2 350 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 H0Y3Z8 333 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NPIPB7O75200 414 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 GCM2O75603 506 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 RCBTB2O95199 551 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 SYNGR4O95473 234 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 GPIP06744 558 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 TPOP07202 933 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NPIPA8P0DM63 369 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 HOXB1P14653 301 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CD1EP15812 388 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CHRNB4P30926 498 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CEACAM8P31997 349 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 OPRM1P35372 400 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 SLC16A1P53985 500 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CASP9P55211 416 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CARD18P57730 90 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 SLC25A3Q00325 362 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 FOXF1Q12946 379 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 DGCR6Q14129 220 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 TAF11Q15544 211 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 ELOA3BQ3SY89 546 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 FBXL19-AS1Q494R0 122 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 ALG10BQ5I7T1 473 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 RPS26P11Q5JNZ5 115 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 FAM69AQ5T7M9 428 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 DESI1Q6ICB0 168 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 OR5M10Q6IEU7 315 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 PAQR6Q6TCH4 344 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 ARSKQ6UWY0 536 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 LINC00114Q6XXX2 140 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 HDDC2Q7Z4H3 204 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 YRDCQ86U90 279 aaKnown RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CD163Q86VB7 1156 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 DHFR2Q86XF0 187 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 OFCC1Q8IZS5 231 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 LILRA2Q8N149 483 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 C10orf111Q8N326 155 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CLIP4Q8N3C7 705 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 AMER2Q8N7J2 671 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 FAM156AQ8NDB6 213 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 PIK3C3Q8NEB9 887 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 ELOA3Q8NG57 546 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 FBXO27Q8NI29 283 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 PIGXQ8TBF5 258 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 LIPHQ8WWY8 451 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 FIG4Q92562 907 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 C3orf49Q96BT1 292 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 SLC7A6OSQ96CW6 309 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 SH3YL1Q96HL8 342 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 PYURFQ96I23 114 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 GMPPAQ96IJ6 420 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 LRGUKQ96M69 825 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NAA11Q9BSU3 229 aaPredicted RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 OSBPL10Q9BXB5 764 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 NDEL1Q9GZM8 345 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 OR10A4Q9H209 315 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 SLC6A15Q9H2J7 730 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 IL1RAPQ9NPH3 570 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 EMC3Q9P0I2 261 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 KLHL9Q9P2J3 617 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 STX18Q9P2W9 335 aaKnown RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 SPRR3Q9UBC9 169 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CLCF1Q9UBD9 225 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 OSGIN1Q9UJX0 560 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 RALYQ9UKM9 306 aaKnown RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 VDAC3Q9Y277 283 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 B3GALT5Q9Y2C3 310 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 ZNF337Q9Y3M9 751 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 FAM32AQ9Y421 112 aaKnown RBP7.62□□□□□ -1.19
PDGFC-205ENST00000506880 CHST2Q9Y4C5 530 aa7.62□□□□□ -1.19
PDGFC-205ENST00000506880 TRAV36DV7A0A075B6V5 113 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 IGKV3D-15A0A087WSY6 115 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 TMED7-TICAM2A0A0A6YYA0 188 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 CENPVL1A0A0U1RR11 272 aa7.61□□□□□ -1.19
PDGFC-205ENST00000506880 A0A1B0GWA3 101 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms