RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 TBXA2RP21731 343 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 GPR4P46093 362 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 FUT5Q11128 374 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 TMEM115Q12893 351 aaPredicted RBP14.71□□□□□ -0.05
SCLT1-208ENST00000506368 ZNF658BQ4V348 819 aaPredicted RBP14.71□□□□□ -0.05
SCLT1-208ENST00000506368 RTP2Q5QGT7 225 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 FAM199XQ6PEV8 388 aaPredicted RBP14.71□□□□□ -0.05
SCLT1-208ENST00000506368 DNM1P46Q6ZS02 220 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 KRT77Q7Z794 578 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 CD180Q99467 661 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 TEAD3Q99594 435 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 SORBS1Q9BX66 1292 aaKnown RBP14.71□□□□□ -0.05
SCLT1-208ENST00000506368 LINC00597Q9H2U6 94 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 BARX1Q9HBU1 254 aaPredicted RBP14.71□□□□□ -0.05
SCLT1-208ENST00000506368 REV3LO60673 3130 aa14.71□□□□□ -0.05
SCLT1-208ENST00000506368 WASH3PC4AMC7 463 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 E9PI62 339 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 GREM1O60565 184 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 RPL17P18621 184 aaKnown RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 RFC3P40938 356 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 CTSCP53634 463 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 RGS8P57771 180 aaPredicted RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 POLR2GP62487 172 aaKnown RBP eCLIP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 ZNF85Q03923 595 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 TGM3Q08188 693 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 TSTA3Q13630 321 aaPredicted RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 CDK5R1Q15078 307 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 RPL22L1Q6P5R6 122 aaKnown RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 HAGHLQ6PII5 290 aaPredicted RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 UNQ9370/PRO34162Q6UXP9 181 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 GDPD4Q6W3E5 623 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SLC36A1Q7Z2H8 476 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 GDF7Q7Z4P5 450 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SPRED2Q7Z698 418 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 C17orf47Q8NEP4 570 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 EDAQ92838 391 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SCAMP4Q969E2 229 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 NARS2Q96I59 477 aaKnown RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 GINS4Q9BRT9 223 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SEMA4CQ9C0C4 833 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 PRO3102Q9H379 93 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 ZDHHC6Q9H6R6 413 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 CDHR4A6H8M9 788 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 CHURC1-FNTBB4DL54 471 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 LAG3P18627 525 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 ANXA7P20073 488 aaKnown RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 PBX2P40425 430 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 STARP49675 285 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 GDI2P50395 445 aaKnown RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 PRR5P85299 388 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 MEF2AQ02078 507 aaPredicted RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 TMEM255AQ5JRV8 349 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 TPGS2Q68CL5 300 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 TMEM220Q6QAJ8 160 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SZRD1Q7Z422 152 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 NPAS4Q8IUM7 802 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 HS6ST2Q96MM7 605 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 TBX5Q99593 518 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 PCBD2Q9H0N5 130 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 ALX4Q9H161 411 aaPredicted RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 DPEP2Q9H4A9 486 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 ELAC1Q9H777 363 aaKnown RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 ADGRL4Q9HBW9 690 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SLC35C2Q9NQQ7 365 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 IL20RAQ9UHF4 553 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SLC25A13Q9UJS0 675 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 COLQQ9Y215 455 aaPredicted RBP14.7□□□□□ -0.06
SCLT1-208ENST00000506368 SLC35A3Q9Y2D2 325 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 PCDHGA5Q9Y5G8 931 aa14.7□□□□□ -0.06
SCLT1-208ENST00000506368 FAM183AA6NL82 134 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 CTSAP10619 480 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 PVALBP20472 110 aaPredicted RBP14.69□□□□□ -0.06
SCLT1-208ENST00000506368 ACVR1BP36896 505 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 HSD17B2P37059 387 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 NDUFAF6Q330K2 333 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 DHRS7BQ6IAN0 325 aaPredicted RBP14.69□□□□□ -0.06
SCLT1-208ENST00000506368 TSSK4Q6SA08 328 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 HSD11B1LQ7Z5J1 315 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 MEX3DQ86XN8 651 aaKnown RBP14.69□□□□□ -0.06
SCLT1-208ENST00000506368 NKAIN4Q8IVV8 208 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 SKA3Q8IX90 412 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 PIGKQ92643 395 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 FOXJ1Q92949 421 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 HAVCR1Q96D42 359 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 CASD1Q96PB1 797 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 MCHR1Q99705 422 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 RIOK2Q9BVS4 552 aaKnown RBP14.69□□□□□ -0.06
SCLT1-208ENST00000506368 MRTO4Q9UKD2 239 aaKnown RBP14.69□□□□□ -0.06
SCLT1-208ENST00000506368 C17orf113A0A1B0GUU1 675 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 IFITM5A6NNB3 132 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 RIIAD1A6NNX1 92 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 DISC1C4P0D8 188 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 GNB5O14775 395 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 ADAM12O43184 909 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 RLN2P04090 185 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 S100A8P05109 93 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 GP1BAP07359 652 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 SMIM6P0DI80 62 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 DPP4P27487 766 aa14.69□□□□□ -0.06
SCLT1-208ENST00000506368 PDHA2P29803 388 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms