RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 ZNF208O43345 1280 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 HNRNPRO43390 633 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 FRS3O43559 492 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 KIR2DL2P43627 348 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 DMTNQ08495 405 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 GLIPR1L2Q4G1C9 344 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 PPP4R4Q6NUP7 873 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 C8orf82Q6P1X6 216 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 ERICH5Q6P6B1 374 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 TMPPEQ6ZT21 453 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 CCDC80Q76M96 950 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 RNF128Q8TEB7 428 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 GMPPAQ96IJ6 420 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 CCT8L2Q96SF2 557 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 HOPXQ9BPY8 73 aaPredicted RBP16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 PIF1Q9H611 641 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 GLRX2Q9NS18 164 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 PACSIN3Q9UKS6 424 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 TMED7Q9Y3B3 224 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 HDGFL3Q9Y3E1 203 aa16.31■□□□□ 0.2
PDLIM7-209ENST00000503346 NBPF19A0A087WUL8 3843 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 TMEM72A0PK05 275 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 FAM220BPB1ANY3 271 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 EEF1E1-BLOC1S5C9J1V9 151 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 EEF1E1O43324 174 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 COX6B1P14854 86 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 CSNK2A1P68400 391 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 VEZF1Q14119 521 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 GTF2IRD2BQ6EKJ0 949 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 FAM214BQ7L5A3 538 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 GTF2IRD2Q86UP8 949 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 CADM2Q8N3J6 435 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 ANKS4BQ8N8V4 417 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 ROBO4Q8WZ75 1007 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 RNASE6Q93091 150 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 STARD4Q96DR4 205 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 LRRC46Q96FV0 321 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 CMTM6Q9NX76 183 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 KLHL28Q9NXS3 571 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 FOXD3Q9UJU5 478 aaPredicted RBP16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 SLC13A4Q9UKG4 626 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 SETXQ7Z333 2677 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 ADGRG4Q8IZF6 3080 aa16.3■□□□□ 0.2
PDLIM7-209ENST00000503346 SHOX2O60902 331 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 SS18L1O75177 396 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 FAM107AO95990 144 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 C8BP07358 591 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 TFPIP10646 304 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 KCNJ5P48544 419 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 DIO1P49895 249 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 HOXC5Q00444 222 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 MYBPHQ13203 477 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 RNPS1Q15287 305 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 FAM91A1Q658Y4 838 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 VWA1Q6PCB0 445 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 FCRLAQ7L513 359 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 SLC15A3Q8IY34 581 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 SLC43A2Q8N370 569 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 LSMEM1Q8N8F7 131 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 CNEP1R1Q8N9A8 125 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 SMYD1Q8NB12 490 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 GPR32P1Q8NGA4 272 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 C3orf49Q96BT1 292 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 TAMM41Q96BW9 452 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 DDIT4LQ96D03 193 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 ARL5BQ96KC2 179 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 LRRC37BQ96QE4 947 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 OR11A1Q9GZK7 315 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 GP6Q9HCN6 339 aa16.29■□□□□ 0.2
PDLIM7-209ENST00000503346 DOCK7Q96N67 2140 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 A8MXE2 369 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 SULT2B1O00204 365 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 MSTNO14793 375 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 DNPH1O43598 174 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 DCTN3O75935 186 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 PMS2P2O95744 297 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 LGI1O95970 557 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 PLGP00747 810 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 CGAP01215 116 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 OPN1SWP03999 348 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 CD8BP10966 210 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 CCNA2P20248 432 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 ENPP1P22413 925 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 CXCR1P25024 350 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 NUDT2P50583 147 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 CRYBA2P53672 197 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 SIRPAP78324 504 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 DUSP7Q16829 419 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 MEX3BQ6ZN04 569 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 BTLAQ7Z6A9 289 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 ATG4DQ86TL0 474 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 DMRTC2Q8IXT2 367 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 OR2T12Q8NG77 320 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 ABHD3Q8WU67 409 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 MARVELD3Q96A59 401 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 ARHGDIGQ99819 225 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 POTEKPQ9BYX7 375 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 C12orf10Q9HB07 376 aa16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 TESQ9UGI8 421 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-209ENST00000503346 CLEC4AQ9UMR7 237 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms