RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 DCAF13Q9NV06 445 aaKnown RBP12.74□□□□□ -0.37
RNF4-202ENST00000502316 PAQR5Q9NXK6 330 aaPredicted RBP12.74□□□□□ -0.37
RNF4-202ENST00000502316 ALKBH4Q9NXW9 302 aa12.74□□□□□ -0.37
RNF4-202ENST00000502316 RPS6KA6Q9UK32 745 aa12.74□□□□□ -0.37
RNF4-202ENST00000502316 SH3GLB1Q9Y371 365 aa12.74□□□□□ -0.37
RNF4-202ENST00000502316 TMED7Q9Y3B3 224 aa12.74□□□□□ -0.37
RNF4-202ENST00000502316 ZNF175Q9Y473 711 aa12.74□□□□□ -0.37
RNF4-202ENST00000502316 DIDO1Q9BTC0 2240 aaKnown RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 MYO7BQ6PIF6 2116 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 NCOA6Q14686 2063 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 A0A0B4J2E0 115 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 A0A1B0GWA3 101 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 A0A1B0GX12 115 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 MBD3L4A6NDZ8 208 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 MBD3L3A6NE82 208 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 WIPF3A6NGB9 483 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 MBD3L5A6NJ08 208 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 KDM4EB2RXH2 506 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 GMNNO75496 209 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 LDLRP01130 860 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 OPN1LWP04000 364 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 GLI4P10075 376 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 TNFRSF1BP20333 461 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 OR1Q1Q15612 314 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 TMEM176BQ3YBM2 270 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 PDSS1Q5T2R2 415 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 TMEM211Q6ICI0 200 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 ZNF613Q6PF04 617 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 ULK3Q6PHR2 472 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 POMZP3Q6PJE2 187 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 VTCN1Q7Z7D3 282 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 TSPYL5Q86VY4 417 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 FAM26EQ8N5C1 309 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 OR10Q1Q8NGQ4 319 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 OR10D3Q8NH80 312 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 MBD3L2Q8NHZ7 208 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 VANGL1Q8TAA9 524 aaPredicted RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 SLC38A4Q969I6 547 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 TPD52L3Q96J77 140 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 MCHR1Q99705 422 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 PRR14Q9BWN1 585 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 POLR2J2Q9GZM3 115 aaKnown RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 POLR2J3Q9H1A7 115 aaKnown RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 TMEM27Q9HBJ8 222 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 ACTR3BQ9P1U1 418 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 SAMD4AQ9UPU9 718 aaKnown RBP12.73□□□□□ -0.37
RNF4-202ENST00000502316 ADGRG4Q8IZF6 3080 aa12.73□□□□□ -0.37
RNF4-202ENST00000502316 ARHGAP21Q5T5U3 1957 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 TMEM72A0PK05 275 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 TNFSF11O14788 317 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 NPIPB7O75200 414 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 PDE5AO76074 875 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ZNF682O95780 498 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 PNMTP11086 282 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 CXCR1P25024 350 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 SLC7A1P30825 629 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 CEACAM8P31997 349 aaPredicted RBP12.72□□□□□ -0.37
RNF4-202ENST00000502316 TIMP3P35625 211 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 EIF1AXP47813 144 aaKnown RBP12.72□□□□□ -0.37
RNF4-202ENST00000502316 OR1E2P47887 323 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 RASSF2P50749 326 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 PER3P56645 1201 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 NUP107P57740 925 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ADORA2A-AS1P86434 159 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 TRIM25Q14258 630 aaKnown RBP12.72□□□□□ -0.37
RNF4-202ENST00000502316 ALG10BQ5I7T1 473 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ENTPD8Q5MY95 495 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 RIPPLY2Q5TAB7 128 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 HBMQ6B0K9 141 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 PGM2L1Q6PCE3 622 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 NCCRP1Q6ZVX7 275 aaPredicted RBP12.72□□□□□ -0.37
RNF4-202ENST00000502316 CHMP1BQ7LBR1 199 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ATP6V1C2Q8NEY4 427 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ADAMTS16Q8TE57 1224 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 GEMIN6Q8WXD5 167 aaKnown RBP12.72□□□□□ -0.37
RNF4-202ENST00000502316 WNT2BQ93097 391 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 DDIT4LQ96D03 193 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ASB9Q96DX5 294 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 SLC47A1Q96FL8 570 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ZNF845Q96IR2 970 aaPredicted RBP12.72□□□□□ -0.37
RNF4-202ENST00000502316 HSH2DQ96JZ2 352 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 CLPTM1LQ96KA5 538 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 ARL5BQ96KC2 179 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 NSMCE2Q96MF7 247 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 THTPAQ9BU02 230 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 RPS6KB2Q9UBS0 482 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 HDGFL3Q9Y3E1 203 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 PCNX1Q96RV3 2341 aa12.72□□□□□ -0.37
RNF4-202ENST00000502316 USP9YO00507 2555 aaPredicted RBP12.71□□□□□ -0.37
RNF4-202ENST00000502316 A0A087WUJ7 227 aa12.71□□□□□ -0.37
RNF4-202ENST00000502316 A0A1W2PNR3 127 aa12.71□□□□□ -0.37
RNF4-202ENST00000502316 ZC3H12DA2A288 527 aaKnown RBP12.71□□□□□ -0.37
RNF4-202ENST00000502316 SLC22A20A6NK97 555 aa12.71□□□□□ -0.37
RNF4-202ENST00000502316 CXCL13O43927 109 aa12.71□□□□□ -0.37
RNF4-202ENST00000502316 DNAJC8O75937 253 aaPredicted RBP12.71□□□□□ -0.37
RNF4-202ENST00000502316 TOXO94900 526 aa12.71□□□□□ -0.37
RNF4-202ENST00000502316 AGFG2O95081 481 aa12.71□□□□□ -0.37
RNF4-202ENST00000502316 LYPD3O95274 346 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms