RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 ACTG1P63261 375 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 TARBP2Q15633 366 aaKnown RBP7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 TIGD5Q53EQ6 642 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 ACSM3Q53FZ2 586 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 ARSIQ5FYB1 569 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 SOHLH1Q5JUK2 328 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 DMRTA1Q5VZB9 504 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 AWAT2Q6E213 333 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 REEP3Q6NUK4 255 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 THNSL2Q86YJ6 484 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 CLECL1Q8IZS7 167 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 HORMAD2Q8N7B1 307 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 OR4K17Q8NGC6 315 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 OR2L2Q8NH16 312 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 OR6X1Q8NH79 312 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 RAB40AQ8WXH6 277 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 FAM122AQ96E09 287 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 KIRREL1Q96J84 757 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 ZNF75AQ96N20 296 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 TOX2Q96NM4 488 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 NELFAQ9H3P2 528 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 ARL5AQ9Y689 179 aa7.64□□□□□ -1.19
CRNKL1-205ENST00000496549 SCN11AQ9UI33 1791 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 C7orf77A4D0Y5 90 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ANKRD61A6NGH8 418 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 UMAD1C9J7I0 102 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 GALR3O60755 368 aaPredicted RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ZNF821O75541 412 aaPredicted RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 RPLP2P05387 115 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ETFAP13804 333 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ALDH3B1P43353 468 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 RPL29P47914 159 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CAMLGP49069 296 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 GSK3AP49840 483 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 NRG3P56975 720 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ZP1P60852 638 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 TEAD2Q15562 447 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ELAVL1Q15717 326 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 LINC00303Q3SY05 128 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 AWAT1Q58HT5 328 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 HENMT1Q5T8I9 393 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ARMC12Q5T9G4 340 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 RIPPLY2Q5TAB7 128 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 EEF1DP3Q658K8 133 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 TMEM205Q6UW68 189 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 TMEM207Q6UWW9 146 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 PRICKLE2Q7Z3G6 844 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 FJX1Q86VR8 437 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 MSRB3Q8IXL7 192 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 DMRTC2Q8IXT2 367 aaPredicted RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CELF5Q8N6W0 485 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 NPWQ8N729 165 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ZNF248Q8NDW4 579 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 OR52B4Q8NGK2 314 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 OR52I2Q8NH67 350 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ACER1Q8TDN7 264 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 TRAPPC12Q8WVT3 735 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 WNT2BQ93097 391 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ZBTB8AQ96BR9 441 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 RIMS4Q9H426 269 aaPredicted RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 AUNIPQ9H7T9 357 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 LSM2Q9Y333 95 aaKnown RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CACNA1SQ13698 1873 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 DCTN6O00399 190 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 PCCBP05166 539 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 USP17L7P0C7H9 530 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 GALP22466 123 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 PTGER3P43115 390 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CXCR3P49682 368 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 BEX3Q00994 111 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SLC10A7Q0GE19 358 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 GUK1Q16774 197 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 IQCJQ1A5X6 159 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 MARCH8Q5T0T0 291 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 NKAIN2Q5VXU1 208 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 RTL10Q7L3V2 364 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 PNPLA1Q8N8W4 532 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 LGALS14Q8TCE9 139 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 R3HDM4Q96D70 268 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 OR51B6Q9H340 312 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 KCNK12Q9HB15 430 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 RPH3ALQ9UNE2 315 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 WDR45Q9Y484 360 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 KCTD3Q9Y597 815 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CHD5Q8TDI0 1954 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 NHSQ6T4R5 1651 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CDK5RAP2Q96SN8 1893 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SHANK3Q9BYB0 1731 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 TRBV23OR9-2A0A075B6M9 112 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 GLTPD2A6NH11 291 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 B4E171 279 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SIAH2O43255 324 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 NDUFB6O95139 128 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 CST2P09228 141 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 ZNF888P0CJ79 500 aaPredicted RBP7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 SDHBP21912 280 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 PYCR1P32322 319 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 GDF5P43026 501 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 MVDP53602 400 aa7.63□□□□□ -1.19
CRNKL1-205ENST00000496549 UBE2MP61081 183 aaKnown RBP7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms