RNA–Protein interactions for RNA: ENST00000496030.1

APTX-233, Transcript of aprataxin, human

TSL 3

Gene APTX, Length 633 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-233	ENST00000496030	ZNF585A	Q6P3V2	769 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	PGM2L1	Q6PCE3	622 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	ENPP6	Q6UWR7	440 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	10.69	□□□□□ -0.7
APTX-233	ENST00000496030	CBLL1	Q75N03	491 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	GRINA	Q7Z429	371 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	LILRA2	Q8N149	483 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	LSMEM1	Q8N8F7	131 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	ZNF563	Q8TA94	476 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	ZPLD1	Q8TCW7	415 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	PHF10	Q8WUB8	498 aa	Known RBP	10.69	□□□□□ -0.7
APTX-233	ENST00000496030	FIG4	Q92562	907 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	PCDHAC1	Q9H158	963 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	TP63	Q9H3D4	680 aa	Predicted RBP	10.69	□□□□□ -0.7
APTX-233	ENST00000496030	TMEM185B	Q9H7F4	350 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	GORASP2	Q9H8Y8	452 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	CACYBP	Q9HB71	228 aa	Known RBP	10.69	□□□□□ -0.7
APTX-233	ENST00000496030	CTPS2	Q9NRF8	586 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	SH3BGRL2	Q9UJC5	107 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	CAMK2A	Q9UQM7	478 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	MEMO1	Q9Y316	297 aa		10.69	□□□□□ -0.7
APTX-233	ENST00000496030	KLF2	Q9Y5W3	355 aa	Predicted RBP	10.69	□□□□□ -0.7
APTX-233	ENST00000496030	TMED7-TICAM2	A0A0A6YYA0	188 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030		A0A1B0GUH1	482 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030		A0A1B0GWA3	101 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030		E9PLN8	166 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	CCL21	O00585	134 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	GSTA4	O15217	222 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	FMO6P	O60774	539 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	WDR1	O75083	606 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	TOX	O94900	526 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	IFNA14	P01570	189 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	THY1	P04216	161 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	HOXD4	P09016	255 aa	Predicted RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	GLI4	P10075	376 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	COX6B1	P14854	86 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	GCK	P35557	465 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	APOBEC1	P41238	236 aa	Known RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	RGS8	P57771	180 aa	Predicted RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	MS4A2	Q01362	244 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	TMEM176B	Q3YBM2	270 aa	Predicted RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	LRRC23	Q53EV4	343 aa	Predicted RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	PLXDC2	Q6UX71	529 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	RPTN	Q6XPR3	784 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	TSEN54	Q7Z6J9	526 aa	Known RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	VTCN1	Q7Z7D3	282 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	ATG4D	Q86TL0	474 aa	Predicted RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	CDH24	Q86UP0	819 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	PM20D2	Q8IYS1	436 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	UBQLNL	Q8IYU4	475 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	ARHGAP24	Q8N264	748 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	CADM2	Q8N3J6	435 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	FAM86B1	Q8N7N1	296 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	TNIP2	Q8NFZ5	429 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	SLC26A7	Q8TE54	656 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	RASSF5	Q8WWW0	418 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	C3orf49	Q96BT1	292 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	CLPTM1L	Q96KA5	538 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	UCN2	Q96RP3	112 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	VKORC1	Q9BQB6	163 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	ZNF559	Q9BR84	538 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	TTYH2	Q9BSA4	534 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	BTBD10	Q9BSF8	475 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	TRIM2	Q9C040	744 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	COQ10B	Q9H8M1	238 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	EVA1A	Q9H8M9	152 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	DCAF13	Q9NV06	445 aa	Known RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	KLHL28	Q9NXS3	571 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	ALKBH4	Q9NXW9	302 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	BAG5	Q9UL15	447 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	PRPF19	Q9UMS4	504 aa	Known RBP	10.68	□□□□□ -0.7
APTX-233	ENST00000496030	SH3GLB1	Q9Y371	365 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	TMED7	Q9Y3B3	224 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	CACNA1C	Q13936	2221 aa		10.68	□□□□□ -0.7
APTX-233	ENST00000496030	INTS1	Q8N201	2190 aa	Known RBP	10.67	□□□□□ -0.7
APTX-233	ENST00000496030	TMEM72	A0PK05	275 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	CD8B2	A6NJW9	211 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	FIGNL2	A6NMB9	653 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	CLCA1	A8K7I4	914 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	ARPC2	O15144	300 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	SERPINA1	P01009	418 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	GABRA1	P14867	456 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	UQCRB	P14927	111 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	HTR3A	P46098	478 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	OR1E2	P47887	323 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	POLR2H	P52434	150 aa	Known RBP	10.67	□□□□□ -0.7
APTX-233	ENST00000496030	ADORA2A-AS1	P86434	159 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	SELENBP1	Q13228	472 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	OR1Q1	Q15612	314 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	C1orf185	Q5T7R7	199 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	NSUN5P2	Q63ZY6	315 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	POMZP3	Q6PJE2	187 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	ESPNL	Q6ZVH7	1005 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	CARM1	Q86X55	608 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	ATP6V1C2	Q8NEY4	427 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	OR52E4	Q8NGH9	312 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	VANGL1	Q8TAA9	524 aa	Predicted RBP	10.67	□□□□□ -0.7
APTX-233	ENST00000496030	SMPDL3B	Q92485	455 aa		10.67	□□□□□ -0.7
APTX-233	ENST00000496030	ZNF845	Q96IR2	970 aa	Predicted RBP	10.67	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms