RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GRAMD2BQ96HH9 432 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 C20orf173Q96LM9 149 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 TSNARE1Q96NA8 513 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 ZNF570Q96NI8 536 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 MUS81Q96NY9 551 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 QRFPRQ96P65 431 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 SH3GL2Q99962 352 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 HAUS8Q9BT25 410 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 C19orf24Q9BVV8 132 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 TTTY12Q9BZ98 90 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 PCBD2Q9H0N5 130 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 ATG10Q9H0Y0 220 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 PLEKHF2Q9H8W4 249 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 SH2D2AQ9NP31 389 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 PAPOLBQ9NRJ5 636 aaKnown RBP3.83□□□□□ -1.8
VPS52-222ENST00000495981 PNPLA3Q9NST1 481 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 ASB6Q9NWX5 421 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 BFARQ9NZS9 450 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 SPRR3Q9UBC9 169 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 OR14J1Q9UGF5 321 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 FBXO5Q9UKT4 447 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 MMACHCQ9Y4U1 282 aa3.83□□□□□ -1.8
VPS52-222ENST00000495981 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 PCLOQ9Y6V0 5065 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 CTAGE9A4FU28 777 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 DPPA5A6NC42 116 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 C5orf52A6NGY3 159 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 SDR42E2A6NKP2 422 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 A6NNC1 897 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 G3V3Y1 287 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 GOLGA8MH3BSY2 632 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 SLC16A5O15375 505 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 OR1F1O43749 312 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 ZBTB14O43829 449 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 CDC40O60508 579 aaKnown RBP eCLIP3.82□□□□□ -1.8
VPS52-222ENST00000495981 B4GALT2O60909 372 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 OR2J2O76002 312 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 WISP3O95389 354 aaPredicted RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 DANCRP0C864 163 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 MYZAPP0CAP1 466 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 G6PDP11413 515 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RNH1P13489 461 aaKnown RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 KRT4P19013 534 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 CD22P20273 847 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 TCEA1P23193 301 aaKnown RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 CERS1P27544 350 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 TIA1P31483 386 aaKnown RBP eCLIP3.82□□□□□ -1.8
VPS52-222ENST00000495981 PCGF2P35227 344 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 AHRP35869 848 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RBMXP38159 391 aaKnown RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 SOX3P41225 446 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 APOBEC1P41238 236 aaKnown RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 SLC6A12P48065 614 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 CCR8P51685 355 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 AP1S2P56377 157 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RAB8AP61006 207 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RGS1Q08116 209 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RCN2Q14257 317 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 CAPRIN1Q14444 709 aaKnown RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 TRIP13Q15645 432 aaPredicted RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 ADPRMQ3LIE5 342 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 FBXL19-AS1Q494R0 122 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 HSP90AA5PQ58FG0 334 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 XKR6Q5GH73 641 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 TOR1AIP1Q5JTV8 583 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 Q5PR19 223 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 PIK3CD-AS1Q5SR53 167 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RNASEH2BQ5TBB1 312 aaKnown RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 HECTD2Q5U5R9 776 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 SIGIRRQ6IA17 410 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 UGT3A1Q6NUS8 523 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 CASC4Q6P4E1 433 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 WDR73Q6P4I2 378 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 FAM57BQ71RH2 274 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 ABHD13Q7L211 337 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 FAM219AQ8IW50 185 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 GPALPP1Q8IXQ4 340 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 LMNTD2Q8IXW0 634 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 EID3Q8N140 333 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RNF10Q8N5U6 811 aaKnown RBP3.82□□□□□ -1.8
VPS52-222ENST00000495981 TMEM251Q8N6I4 163 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 TEX9Q8N6V9 391 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 ZNF321PQ8N8H1 164 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 SCCPDHQ8NBX0 429 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 MAPK1IP1LQ8NDC0 245 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 WDR20Q8TBZ3 569 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 MCOLN3Q8TDD5 553 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 EEF1AKMT1Q8WVE0 214 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 ASB5Q8WWX0 329 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 SLC5A11Q8WWX8 675 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 SLC9A6Q92581 669 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RND1Q92730 232 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 NCLNQ969V3 563 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 MOAP1Q96BY2 351 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 MS4A6EQ96DS6 147 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 RASL10BQ96S79 203 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 TTYH2Q9BSA4 534 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 TMEM79Q9BSE2 394 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 KATNB1Q9BVA0 655 aa3.82□□□□□ -1.8
VPS52-222ENST00000495981 TSGA10Q9BZW7 698 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms