RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 HSD17B8Q92506 261 aa21.52■■□□□ 1.04
HLA-C-209ENST00000495835 CCDC28BQ9BUN5 200 aa21.52■■□□□ 1.04
HLA-C-209ENST00000495835 RAD21L1Q9H4I0 556 aa21.52■■□□□ 1.04
HLA-C-209ENST00000495835 TCF7L2Q9NQB0 619 aa21.52■■□□□ 1.04
HLA-C-209ENST00000495835 SLC6A13Q9NSD5 602 aa21.52■■□□□ 1.04
HLA-C-209ENST00000495835 EMC3Q9P0I2 261 aa21.52■■□□□ 1.04
HLA-C-209ENST00000495835 IGKV3D-15A0A087WSY6 115 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 IGHV3-15A0A0B4J1V0 119 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.51■■□□□ 1.03
HLA-C-209ENST00000495835 TMEM247A6NEH6 219 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 TMCC2O75069 709 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 TFPTP0C1Z6 253 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 TFPIP10646 304 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 CRATP43155 626 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 POLR2HP52434 150 aaKnown RBP21.51■■□□□ 1.03
HLA-C-209ENST00000495835 DSTNP60981 165 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 MAPK11Q15759 364 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 SHEQ5VZ18 495 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 GALNT5Q7Z7M9 940 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 GTF2H4Q92759 462 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 NGBQ9NPG2 151 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 RAI1Q7Z5J4 1906 aaPredicted RBP21.51■■□□□ 1.03
HLA-C-209ENST00000495835 MTORP42345 2549 aa21.51■■□□□ 1.03
HLA-C-209ENST00000495835 A0A0G2JPF8 293 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 CFAP73A6NFT4 308 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 HNRNPCL2B2RXH8 293 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 HNRNPCL3B7ZW38 293 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 GPR171O14626 319 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 HNRNPCL1O60812 293 aaKnown RBP21.5■■□□□ 1.03
HLA-C-209ENST00000495835 ADAM11O75078 769 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 FESP07332 822 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 HNRNPCL4P0DMR1 293 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 EPS8Q12929 822 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 LIN52Q52LA3 116 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 MRPL2Q5T653 305 aaKnown RBP21.5■■□□□ 1.03
HLA-C-209ENST00000495835 PRAMEF8Q5VWM4 474 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 PRAMEF7Q5VXH5 474 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 ABLIM2Q6H8Q1 611 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 OR9I1Q8NGQ6 314 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 PIGXQ8TBF5 258 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 KISS1RQ969F8 398 aaPredicted RBP21.5■■□□□ 1.03
HLA-C-209ENST00000495835 DDIT4LQ96D03 193 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 HS3ST6Q96QI5 342 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 ARMC7Q9H6L4 198 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 TMEM181Q9P2C4 612 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 ZNF232Q9UNY5 417 aa21.5■■□□□ 1.03
HLA-C-209ENST00000495835 TMED7-TICAM2A0A0A6YYA0 188 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 CDHR4A6H8M9 788 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 ZNF814B7Z6K7 855 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 ARHGEF9O43307 516 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 EIF1BO60739 113 aaKnown RBP21.49■■□□□ 1.03
HLA-C-209ENST00000495835 ADAP00813 363 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 THBS1P07996 1170 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 ETFAP13804 333 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 IL32P24001 234 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 FADDQ13158 208 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 C6orf10Q5SRN2 563 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 OR52P1PQ8NH57 321 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 SLC38A5Q8WUX1 472 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 VPS33AQ96AX1 596 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 S100PBPQ96BU1 408 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 ARL5BQ96KC2 179 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 TMEM204Q9BSN7 226 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 ADAM19Q9H013 955 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 VIPAS39Q9H9C1 493 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 OSGIN1Q9UJX0 560 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 IFT52Q9Y366 437 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 TMED7Q9Y3B3 224 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 PCDHB14Q9Y5E9 798 aa21.49■■□□□ 1.03
HLA-C-209ENST00000495835 SETD2Q9BYW2 2564 aaPredicted RBP21.49■■□□□ 1.03
HLA-C-209ENST00000495835 DSCAMO60469 2012 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 HMGB1P1B2RPK0 211 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-209ENST00000495835 IDH3AP50213 366 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 SLC16A1P53985 500 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 NKX6-1P78426 367 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-209ENST00000495835 H3F3AP84243 136 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 FOXD4Q12950 439 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-209ENST00000495835 LARS2Q15031 903 aaKnown RBP21.48■■□□□ 1.03
HLA-C-209ENST00000495835 RNF220Q5VTB9 566 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 DNAJC14Q6Y2X3 702 aaPredicted RBP21.48■■□□□ 1.03
HLA-C-209ENST00000495835 HDXQ7Z353 690 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 HMGN2P46Q86SG4 172 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 GOLGA6L1Q8N7Z2 621 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 DYDC1Q8WWB3 177 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 STON2Q8WXE9 905 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 PAIP1Q9H074 479 aaKnown RBP21.48■■□□□ 1.03
HLA-C-209ENST00000495835 UBTD1Q9HAC8 227 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 CACYBPQ9HB71 228 aaKnown RBP21.48■■□□□ 1.03
HLA-C-209ENST00000495835 SLCO1B3Q9NPD5 702 aa21.48■■□□□ 1.03
HLA-C-209ENST00000495835 C2CD3Q4AC94 2353 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 A0A096LPI6 279 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 ZNF716A6NP11 495 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 CLIC1O00299 241 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 AP3D1O14617 1153 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 SMPD2O60906 423 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 BCHEP06276 602 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 BMP2P12643 396 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 TACR3P29371 465 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 RGNQ15493 299 aa21.47■■□□□ 1.03
HLA-C-209ENST00000495835 TTMPQ5BVD1 217 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms