RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 F8P00451 2351 aa29.52■■■□□ 2.32
CBX4-203ENST00000494546 TMED7-TICAM2A0A0A6YYA0 188 aa29.52■■■□□ 2.32
CBX4-203ENST00000494546 THBDP07204 575 aa29.52■■■□□ 2.32
CBX4-203ENST00000494546 NUDT7P0C024 238 aa29.52■■■□□ 2.32
CBX4-203ENST00000494546 AGKQ53H12 422 aa29.52■■■□□ 2.32
CBX4-203ENST00000494546 LSRQ86X29 649 aaPredicted RBP29.52■■■□□ 2.32
CBX4-203ENST00000494546 ZNF440Q8IYI8 595 aa29.52■■■□□ 2.32
CBX4-203ENST00000494546 ZNF300Q96RE9 604 aaPredicted RBP29.52■■■□□ 2.32
CBX4-203ENST00000494546 CACYBPQ9HB71 228 aaKnown RBP29.52■■■□□ 2.32
CBX4-203ENST00000494546 ZNF443Q9Y2A4 671 aaPredicted RBP29.52■■■□□ 2.32
CBX4-203ENST00000494546 TMED7Q9Y3B3 224 aa29.52■■■□□ 2.32
CBX4-203ENST00000494546 CDHR4A6H8M9 788 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 GKN3PP0CG01 181 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 HOXB9P17482 250 aaPredicted RBP29.51■■■□□ 2.31
CBX4-203ENST00000494546 PSMB1P20618 241 aaKnown RBP29.51■■■□□ 2.31
CBX4-203ENST00000494546 FKBP2P26885 142 aaKnown RBP29.51■■■□□ 2.31
CBX4-203ENST00000494546 TACR3P29371 465 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 POLR2HP52434 150 aaKnown RBP29.51■■■□□ 2.31
CBX4-203ENST00000494546 SQLEQ14534 574 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 MTDHQ86UE4 582 aaKnown RBP29.51■■■□□ 2.31
CBX4-203ENST00000494546 ZHX1-C8orf76Q96EF9 292 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 CXXC4Q9H2H0 198 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 SLC25A37Q9NYZ2 338 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 SLAMF8Q9P0V8 285 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 OSGIN1Q9UJX0 560 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 HDGFL3Q9Y3E1 203 aa29.51■■■□□ 2.31
CBX4-203ENST00000494546 CELSR1Q9NYQ6 3014 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 A0A0G2JPF8 293 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 HNRNPCL2B2RXH8 293 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 HNRNPCL3B7ZW38 293 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 FAAHO00519 579 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 HNRNPCL1O60812 293 aaKnown RBP29.5■■■□□ 2.31
CBX4-203ENST00000494546 PMS2P2O95744 297 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 HNRNPCL4P0DMR1 293 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 SLC1A3P43003 542 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 ATP4BP51164 291 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 FADDQ13158 208 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 LARS2Q15031 903 aaKnown RBP29.5■■■□□ 2.31
CBX4-203ENST00000494546 GABRG1Q8N1C3 465 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 MAL2Q969L2 176 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 MBD6Q96DN6 1003 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 ZNF232Q9UNY5 417 aa29.5■■■□□ 2.31
CBX4-203ENST00000494546 TMEM72A0PK05 275 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 GCM2O75603 506 aaPredicted RBP29.49■■■□□ 2.31
CBX4-203ENST00000494546 CLK1P49759 484 aaKnown RBP29.49■■■□□ 2.31
CBX4-203ENST00000494546 OR2B6P58173 313 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 TSC22D1Q15714 1073 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 PAGE3Q5JUK9 113 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 LRIF1Q5T3J3 769 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 MSRB3Q8IXL7 192 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 HS3ST6Q96QI5 342 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 A4GALTQ9NPC4 353 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 SLC52A3Q9NQ40 469 aa29.49■■■□□ 2.31
CBX4-203ENST00000494546 ZNF724A8MTY0 619 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 ADAP00813 363 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 THBS1P07996 1170 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 NCF2P19878 526 aaPredicted RBP29.48■■■□□ 2.31
CBX4-203ENST00000494546 DEFB113Q30KQ7 82 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 ALKBH2Q6NS38 261 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 WFDC8Q8IUA0 241 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 CLIP4Q8N3C7 705 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 STEAP2Q8NFT2 490 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 DDIT4LQ96D03 193 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 ALPK1Q96QP1 1244 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 HDHD5Q9BXW7 423 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 OR10A4Q9H209 315 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 TMEM45AQ9NWC5 275 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 DCTN4Q9UJW0 460 aa29.48■■■□□ 2.31
CBX4-203ENST00000494546 C5orf58C9J3I9 102 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 OR3A2P47893 321 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 IRX1P78414 480 aaPredicted RBP29.47■■■□□ 2.31
CBX4-203ENST00000494546 RNF220Q5VTB9 566 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 ABLIM2Q6H8Q1 611 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 ZC3HAV1Q7Z2W4 902 aaKnown RBP29.47■■■□□ 2.31
CBX4-203ENST00000494546 GALNT5Q7Z7M9 940 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 CADM2Q8N3J6 435 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 S100PBPQ96BU1 408 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 ARMC7Q9H6L4 198 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 NPHS2Q9NP85 383 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 TMEM181Q9P2C4 612 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 PRSS50Q9UI38 385 aa29.47■■■□□ 2.31
CBX4-203ENST00000494546 ZNF814B7Z6K7 855 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 ZNF208O43345 1280 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 BMP2P12643 396 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 IL32P24001 234 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 ACAA2P42765 397 aaKnown RBP29.46■■■□□ 2.31
CBX4-203ENST00000494546 BEX5Q5H9J7 111 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 SFRP5Q5T4F7 317 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 ZNF100Q8IYN0 542 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 SPATA9Q9BWV2 254 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 ADAM19Q9H013 955 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 RABEP2Q9H5N1 569 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 UBTD1Q9HAC8 227 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 BCL2L10Q9HD36 194 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 EMC3Q9P0I2 261 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 VAPAQ9P0L0 249 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 IFT52Q9Y366 437 aa29.46■■■□□ 2.31
CBX4-203ENST00000494546 TEP1Q99973 2627 aaKnown RBP29.46■■■□□ 2.31
CBX4-203ENST00000494546 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP29.45■■■□□ 2.31
CBX4-203ENST00000494546 KLF4O43474 513 aa29.45■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms