RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 CCNA2P20248 432 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CHRNB4P30926 498 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 ZNF136P52737 540 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 PON3Q15166 354 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 SPATS1Q496A3 300 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CYBRD1Q53TN4 286 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 SEM1Q6ZVN7 128 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CCDC71Q8IV32 467 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 RBM15BQ8NDT2 890 aaKnown RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 DDIT4LQ96D03 193 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 ZNF845Q96IR2 970 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 ARHGDIGQ99819 225 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 RNF6Q9Y252 685 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 NCOA6Q14686 2063 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 HELZ2Q9BYK8 2649 aaKnown RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 A0A0G2JNJ9 132 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 ELOA3DA6NLF2 546 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 ZNF208O43345 1280 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 FMO6PO60774 539 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 RNF224P0DH78 156 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 TCN1P20061 433 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 HTR1EP28566 365 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CEACAM8P31997 349 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CLK1P49759 484 aaKnown RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CRYBA2P53672 197 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CSNK2A1P68400 391 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 ELOA3BQ3SY89 546 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 OR2A2Q6IF42 318 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 RNF148Q8N7C7 305 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 LSMEM1Q8N8F7 131 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 C9orf106Q8NAJ2 232 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 ELOA3Q8NG57 546 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 VANGL1Q8TAA9 524 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 RNF217Q8TC41 542 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CA5BP1Q8WTZ4 195 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 DNAJA4Q8WW22 397 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 CPNE4Q96A23 557 aaPredicted RBP11.2□□□□□ -0.62
TRA2A-209ENST00000494255 C3orf49Q96BT1 292 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 TPD52L3Q96J77 140 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 MCHR1Q99705 422 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 Q9UFV3 132 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 PACSIN3Q9UKS6 424 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 SH3GLB1Q9Y371 365 aa11.2□□□□□ -0.62
TRA2A-209ENST00000494255 A0A1B0GWA3 101 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 A0A1W2PNR3 127 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 TMEM72A0PK05 275 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 SULT2B1O00204 365 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 TOXO94900 526 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 UBOX5O94941 541 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 RCBTB2O95199 551 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 TGM6O95932 706 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 TMIGD3P0DMS9 266 aaPredicted RBP11.19□□□□□ -0.62
TRA2A-209ENST00000494255 T-ENOLP0DO92 83 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 HSD17B1P14061 328 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 GGT1P19440 569 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 HTR2AP28223 471 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 CPOXP36551 454 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 ULK3Q6PHR2 472 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 PLXDC2Q6UX71 529 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 RINLQ6ZS11 566 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 ARHGAP24Q8N264 748 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 OR6T1Q8NGN1 323 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 FNDC9Q8TBE3 224 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 ZHX1-C8orf76Q96EF9 292 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 OR11A1Q9GZK7 315 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 COQ10BQ9H8M1 238 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 EGFL7Q9UHF1 273 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 HDGFL3Q9Y3E1 203 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 KIAA1549Q9HCM3 1950 aa11.19□□□□□ -0.62
TRA2A-209ENST00000494255 CLDN14O95500 239 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 ZNF682O95780 498 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 PNMTP11086 282 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 NCK1P16333 377 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 CTSSP25774 331 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 RAC3P60763 192 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 SELENOWP63302 87 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 OR1Q1Q15612 314 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 ZNF239Q16600 458 aaKnown RBP11.18□□□□□ -0.62
TRA2A-209ENST00000494255 ALG10BQ5I7T1 473 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 EEF1A1P5Q5VTE0 462 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 GTF2IRD2BQ6EKJ0 949 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 GLYATQ6IB77 296 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 TMPPEQ6ZT21 453 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 ATG4DQ86TL0 474 aaPredicted RBP11.18□□□□□ -0.62
TRA2A-209ENST00000494255 GTF2IRD2Q86UP8 949 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 CARM1Q86X55 608 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 MCEMP1Q8IX19 187 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 GCNT2Q8N0V5 402 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 INTS12Q96CB8 462 aaKnown RBP11.18□□□□□ -0.62
TRA2A-209ENST00000494255 SLC47A1Q96FL8 570 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 PRR14Q9BWN1 585 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 SRXN1Q9BYN0 137 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 C12orf10Q9HB07 376 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 CD300AQ9UGN4 299 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 MAGEL2Q9UJ55 1249 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 RPS6KA6Q9UK32 745 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 DOCK7Q96N67 2140 aa11.18□□□□□ -0.62
TRA2A-209ENST00000494255 GCN1Q92616 2671 aaKnown RBP11.18□□□□□ -0.62
TRA2A-209ENST00000494255 CPSF4LA6NMK7 179 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms