RNA–Protein interactions for RNA: ENST00000493208.1

IRF1-210, Transcript of interferon regulatory factor 1, humanhuman

TSL 1 (best)

Gene IRF1, Length 1,023 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-210ENST00000493208 TAPBPLQ9BX59 468 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 COQ10BQ9H8M1 238 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 TPT1P8Q9HAU6 139 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 TCF7L2Q9NQB0 619 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 TMEM181Q9P2C4 612 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 TRIM33Q9UPN9 1127 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 SLC9A8Q9Y2E8 581 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 NOSIPQ9Y314 301 aaKnown RBP12.1□□□□□ -0.47
IRF1-210ENST00000493208 USH1CQ9Y6N9 552 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 MED12Q93074 2177 aa12.1□□□□□ -0.47
IRF1-210ENST00000493208 KIAA1549Q9HCM3 1950 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 OIP5O43482 229 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 MRPL33O75394 65 aaKnown RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 ADAP00813 363 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 GSNP06396 782 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 GPIP06744 558 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 THBS1P07996 1170 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 CD53P19397 219 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 GGT1P19440 569 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 PAX7P23759 505 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 GTF2E2P29084 291 aaKnown RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 ADSLP30566 484 aaPredicted RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 OR2B6P58173 313 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 SYPL1Q16563 259 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 KLHL17Q6TDP4 642 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 ZNF704Q6ZNC4 412 aaPredicted RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 BHLHA15Q7RTS1 189 aaPredicted RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 ABHD12BQ7Z5M8 362 aaPredicted RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 BIVMQ86UB2 503 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 MED12LQ86YW9 2145 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 GABRG1Q8N1C3 465 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 DEPDC4Q8N2C3 294 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 BHLHE22Q8NFJ8 381 aaPredicted RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 OR52P1PQ8NH57 321 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 PNPT1Q8TCS8 783 aaKnown RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 SLC35B4Q969S0 331 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 S100PBPQ96BU1 408 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 TRMT61AQ96FX7 289 aaKnown RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 PLPPR2Q96GM1 343 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 SIKE1Q9BRV8 207 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 CCDC28BQ9BUN5 200 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 BDH2Q9BUT1 245 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 QRSL1Q9H0R6 528 aaKnown RBP12.09□□□□□ -0.47
IRF1-210ENST00000493208 SLC38A1Q9H2H9 487 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 CTPS2Q9NRF8 586 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 SLC13A4Q9UKG4 626 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 RNF115Q9Y4L5 304 aa12.09□□□□□ -0.47
IRF1-210ENST00000493208 TMED7-TICAM2A0A0A6YYA0 188 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 CIB4A0PJX0 185 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 EVPLLA8MZ36 301 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 SMAD9O15198 467 aaKnown RBP12.08□□□□□ -0.48
IRF1-210ENST00000493208 BCHEP06276 602 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 SHC1P29353 583 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 ADAM8P78325 824 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 MAPK14Q16539 360 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 SLC9B1Q4ZJI4 515 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 TIMM23BQ5SRD1 257 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 MRPL2Q5T653 305 aaKnown RBP12.08□□□□□ -0.48
IRF1-210ENST00000493208 RNF220Q5VTB9 566 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 WBP2NLQ6ICG8 309 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 OR7E24Q6IFN5 339 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 ALKBH2Q6NS38 261 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 EPGNQ6UW88 154 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 DNAJC14Q6Y2X3 702 aaPredicted RBP12.08□□□□□ -0.48
IRF1-210ENST00000493208 PIAS4Q8N2W9 510 aaPredicted RBP12.08□□□□□ -0.48
IRF1-210ENST00000493208 ANKFN1Q8N957 763 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 BBS10Q8TAM1 723 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 TEX37Q96LM6 180 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 NPAS1Q99742 590 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 INPP5KQ9BT40 448 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 ALG2Q9H553 416 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 PIF1Q9H611 641 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 EVA1AQ9H8M9 152 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 INTS9Q9NV88 658 aaKnown RBP12.08□□□□□ -0.48
IRF1-210ENST00000493208 ASB6Q9NWX5 421 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 SELENONQ9NZV5 590 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 UPB1Q9UBR1 384 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 RPS6KB2Q9UBS0 482 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 KCNE5Q9UJ90 142 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 MGAT4BQ9UQ53 548 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 TMED7Q9Y3B3 224 aa12.08□□□□□ -0.48
IRF1-210ENST00000493208 MAGED1Q9Y5V3 778 aaPredicted RBP12.08□□□□□ -0.48
IRF1-210ENST00000493208 IGKV3D-15A0A087WSY6 115 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 IGHV3-15A0A0B4J1V0 119 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 PRORSD1PA6NEY8 169 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 OR6C65A6NJZ3 312 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 CCT8L1PA6NM43 557 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 HS3ST1O14792 307 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 EFNA2O43921 213 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 VAMP5O95183 116 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 TACR3P29371 465 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 IDUAP35475 653 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 MRPL19P49406 292 aaKnown RBP12.07□□□□□ -0.48
IRF1-210ENST00000493208 NCALDP61601 193 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 FOXD4Q12950 439 aaPredicted RBP12.07□□□□□ -0.48
IRF1-210ENST00000493208 PPA1Q15181 289 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 STK11Q15831 433 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 ETFDHQ16134 617 aa12.07□□□□□ -0.48
IRF1-210ENST00000493208 Q5PR19 223 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms