RNA–Protein interactions for RNA: ENST00000489430.1

MRPL55-230, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-230ENST00000489430 TSPEARQ8WU66 669 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 MBD6Q96DN6 1003 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 ZHX1-C8orf76Q96EF9 292 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 TMEM19Q96HH6 336 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 FOXC2Q99958 501 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 PSD2Q9BQI7 771 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 PLEKHF2Q9H8W4 249 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 ITGB1BP2Q9UKP3 347 aa16.93■□□□□ 0.3
MRPL55-230ENST00000489430 NR5A2O00482 541 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 ADAM11O75078 769 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 CNOT4O95628 575 aaKnown RBP16.92■□□□□ 0.3
MRPL55-230ENST00000489430 P2RY6Q15077 328 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 EXOC3L2Q2M3D2 409 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 AGKQ53H12 422 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 TFAP2EQ6VUC0 442 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 ZNF550Q7Z398 422 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 ADAM19Q9H013 955 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 KLHL28Q9NXS3 571 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 SLC25A37Q9NYZ2 338 aa16.92■□□□□ 0.3
MRPL55-230ENST00000489430 IGKV3D-15A0A087WSY6 115 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 TRBV5-3A0A0A0MS03 114 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 SMAD9O15198 467 aaKnown RBP16.91■□□□□ 0.3
MRPL55-230ENST00000489430 TFPIP10646 304 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 ETS2P15036 469 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 DNASE1P24855 282 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 IST1P53990 364 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 RASGEF1BQ0VAM2 473 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 PAMR1Q6UXH9 720 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 HMGN2P46Q86SG4 172 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 GABRG1Q8N1C3 465 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 STEAP2Q8NFT2 490 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 BBS10Q8TAM1 723 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 DDIT4LQ96D03 193 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 SPATA9Q9BWV2 254 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 KLHL4Q9C0H6 718 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 CXXC4Q9H2H0 198 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 EMC3Q9P0I2 261 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 OSGIN1Q9UJX0 560 aa16.91■□□□□ 0.3
MRPL55-230ENST00000489430 ING1Q9UK53 422 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-230ENST00000489430 ZNF443Q9Y2A4 671 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-230ENST00000489430 TMED7-TICAM2A0A0A6YYA0 188 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 DEFB108AA8MXU0 73 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 AP3D1O14617 1153 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 EIF1BO60739 113 aaKnown RBP16.9■□□□□ 0.3
MRPL55-230ENST00000489430 PGM3O95394 542 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 GPX2P18283 190 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 TACR3P29371 465 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 COPZ1P61923 177 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 PAGE3Q5JUK9 113 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 ABLIM2Q6H8Q1 611 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 WBP2NLQ6ICG8 309 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 ZNF836Q6ZNA1 936 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 SSX8Q7RTT4 187 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 VRK2Q86Y07 508 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 MSRB3Q8IXL7 192 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 DPP10Q8N608 796 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 NRGNQ92686 78 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 ZNF385DQ9H6B1 395 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 C12orf49Q9H741 205 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 RLIMQ9NVW2 624 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 VAPAQ9P0L0 249 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 TMEM181Q9P2C4 612 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 LEF1Q9UJU2 399 aaPredicted RBP16.9■□□□□ 0.3
MRPL55-230ENST00000489430 TMED7Q9Y3B3 224 aa16.9■□□□□ 0.3
MRPL55-230ENST00000489430 EVPLLA8MZ36 301 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 C5orf58C9J3I9 102 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 GPR171O14626 319 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 RAF1P04049 648 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 FESP07332 822 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 ACAA2P42765 397 aaKnown RBP16.89■□□□□ 0.29
MRPL55-230ENST00000489430 OR3A2P47893 321 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 ART1P52961 327 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 SLC16A1P53985 500 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 SLC35A1P78382 337 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 H3F3AP84243 136 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 NUFIP2Q7Z417 695 aaKnown RBP16.89■□□□□ 0.29
MRPL55-230ENST00000489430 GALNT5Q7Z7M9 940 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 PIGXQ8TBF5 258 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 ARL5BQ96KC2 179 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 ALPK1Q96QP1 1244 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 SPATA5L1Q9BVQ7 753 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 POTEKPQ9BYX7 375 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 TMEM38AQ9H6F2 299 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 NPHS2Q9NP85 383 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 SLAMF8Q9P0V8 285 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 DCTN4Q9UJW0 460 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 HEATR5AQ86XA9 2040 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 MPDZO75970 2070 aa16.89■□□□□ 0.29
MRPL55-230ENST00000489430 IGHV3-15A0A0B4J1V0 119 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 GCM2O75603 506 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-230ENST00000489430 NUDT7P0C024 238 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 ARAFP10398 606 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 NCF2P19878 526 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-230ENST00000489430 PRKAR1BP31321 381 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 NR1H2P55055 460 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 ZNF311Q5JNZ3 666 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 GCNT6Q5T4J0 391 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 REEP3Q6NUK4 255 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 DLEU7Q6UYE1 221 aa16.88■□□□□ 0.29
MRPL55-230ENST00000489430 Q6ZT83 130 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms