RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 DDX5P17844 614 aaKnown RBP10.13□□□□□ -0.79
TRIM56-204ENST00000487252 IL12BP29460 328 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 VHLP40337 213 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 ATP4BP51164 291 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 CARD18P57730 90 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 CUL3Q13618 768 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 MLC1Q15049 377 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 OR4D1Q15615 310 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 UGT3A2Q3SY77 523 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 TRMT12Q53H54 448 aaKnown RBP10.13□□□□□ -0.79
TRIM56-204ENST00000487252 ZNF628Q5EBL2 1059 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 NPSR1Q6W5P4 371 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 SNX32Q86XE0 403 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 RNF175Q8N4F7 328 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 NANPQ8TBE9 248 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 AGR3Q8TD06 166 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 NRG4Q8WWG1 115 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 TAF15Q92804 592 aaKnown RBP eCLIP10.13□□□□□ -0.79
TRIM56-204ENST00000487252 STMN2Q93045 179 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 UBE2E3Q969T4 207 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 C1QTNF3Q9BXJ4 246 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 SRXN1Q9BYN0 137 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 BRINP2Q9C0B6 783 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 TNFRSF12AQ9NP84 129 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 TMCO1Q9UM00 188 aa10.13□□□□□ -0.79
TRIM56-204ENST00000487252 STX16-NPEPL1H3BU86 382 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 STX16O14662 325 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 KERAO60938 352 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 PRSS23O95084 383 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 IGFBP1P08833 259 aaPredicted RBP10.12□□□□□ -0.79
TRIM56-204ENST00000487252 ADRA2CP18825 462 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 FPR2P25090 351 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 MRPS22P82650 360 aaKnown RBP10.12□□□□□ -0.79
TRIM56-204ENST00000487252 CHRNEQ04844 493 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 DUSP2Q05923 314 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 RASGEF1BQ0VAM2 473 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 STX5Q13190 355 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 CHIT1Q13231 466 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 CYLC2Q14093 348 aaPredicted RBP10.12□□□□□ -0.79
TRIM56-204ENST00000487252 PDSS1Q5T2R2 415 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 C1orf146Q5VVC0 180 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 ASPHD2Q6ICH7 369 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 MED27Q6P2C8 311 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 C16orf89Q6UX73 402 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 FCRLAQ7L513 359 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 DEFB107AQ8IZN7 70 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 SIGLECL1Q8N7X8 197 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 HUS1BQ8NHY5 278 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 JADE3Q92613 823 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 CPNE4Q96A23 557 aaPredicted RBP10.12□□□□□ -0.79
TRIM56-204ENST00000487252 EFHD2Q96C19 240 aaPredicted RBP10.12□□□□□ -0.79
TRIM56-204ENST00000487252 RSRC1Q96IZ7 334 aaKnown RBP10.12□□□□□ -0.79
TRIM56-204ENST00000487252 VSTM2LQ96N03 204 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 MUS81Q96NY9 551 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 DUX5Q96PT3 197 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 SHCBP1LQ9BZQ2 653 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 CXorf36Q9H7Y0 433 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 SLC52A3Q9NQ40 469 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 NDE1Q9NXR1 346 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 FLRT3Q9NZU0 649 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 FBXO9Q9UK97 447 aaPredicted RBP10.12□□□□□ -0.79
TRIM56-204ENST00000487252 CES1P1Q9UKY3 287 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 TSC22D4Q9Y3Q8 395 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 TRAF6Q9Y4K3 522 aa10.12□□□□□ -0.79
TRIM56-204ENST00000487252 A0A1W2PR80 420 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 RAD51DO75771 328 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 RPS17P08708 135 aaKnown RBP10.11□□□□□ -0.79
TRIM56-204ENST00000487252 ANPEPP15144 967 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 ACADSP16219 412 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 ATP6V1C1P21283 382 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 PIK3CBP42338 1070 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 MRPL19P49406 292 aaKnown RBP10.11□□□□□ -0.79
TRIM56-204ENST00000487252 MANFP55145 182 aaKnown RBP10.11□□□□□ -0.79
TRIM56-204ENST00000487252 LMO4P61968 165 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 IRF8Q02556 426 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 TAF11Q15544 211 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 TGFBIQ15582 683 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 ADIPOQQ15848 244 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 TCHHL1Q5QJ38 904 aaPredicted RBP10.11□□□□□ -0.79
TRIM56-204ENST00000487252 KANK2Q63ZY3 851 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 CYP20A1Q6UW02 462 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 LRRC74BQ6ZQY2 392 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 PGAM4Q8N0Y7 254 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 PTGR2Q8N8N7 351 aaPredicted RBP10.11□□□□□ -0.79
TRIM56-204ENST00000487252 WDR31Q8NA23 367 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 TOR1AIP2Q8NFQ8 470 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 OR4N2Q8NGD1 307 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 STAG3L4Q8TBR4 150 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 UBASH3BQ8TF42 649 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 C22orf15Q8WYQ4 148 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 UBE2FQ969M7 185 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 REXO5Q96IC2 774 aaKnown RBP10.11□□□□□ -0.79
TRIM56-204ENST00000487252 KLHL15Q96M94 604 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 PSD2Q9BQI7 771 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 CENPKQ9BS16 269 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 S100A14Q9HCY8 104 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 CA10Q9NS85 328 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 NMRK1Q9NWW6 199 aa10.11□□□□□ -0.79
TRIM56-204ENST00000487252 FAM120CQ9NX05 1096 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 94.2 ms