RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 CSTF1Q05048 431 aaKnown RBP24.02■■□□□ 1.44
HLA-C-208ENST00000487245 DMKNQ6E0U4 476 aaPredicted RBP24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ARHGAP11AQ6P4F7 1023 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ARL9Q6T311 187 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 RTL4Q6ZR62 310 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 GKN2Q86XP6 184 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF614Q8N883 585 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 UPRTQ96BW1 309 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ART5Q96L15 291 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 PPIL3Q9H2H8 161 aaKnown RBP24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ERVMER34-1Q9H9K5 563 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 Q9N2J8 555 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 SLC2A4RGQ9NR83 387 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 FLRT3Q9NZU0 649 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 CDH23Q9H251 3354 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 A0A0G2JK05 382 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 LILRA5A6NI73 299 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 E9PI62 339 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 IFNGP01579 166 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 CTSBP07858 339 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 TALDO1P37837 337 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 RPS7P62081 194 aaKnown RBP24.02■■□□□ 1.44
HLA-C-208ENST00000487245 SFXN4Q6P4A7 337 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ARL14Q8N4G2 192 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 MS4A15Q8N5U1 240 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 TSTD1Q8NFU3 115 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 GRHL3Q8TE85 626 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 SMPDL3BQ92485 455 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 PEX11GQ96HA9 241 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 ZNF285Q96NJ3 590 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 NOX1Q9Y5S8 564 aa24.02■■□□□ 1.44
HLA-C-208ENST00000487245 A0A0G2JMP0 313 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 A0A0X1KG70 313 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 RFPL3O75679 317 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 CAPZBP47756 277 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 ATP12AP54707 1039 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 NRG3P56975 720 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 CD83Q01151 205 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 BIKQ13323 160 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 FHL1Q13642 323 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 CRMP1Q14194 572 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 FGFBP1Q14512 234 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 LINC00114Q6XXX2 140 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 OR4M2Q8NGB6 313 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 PGLYRP3Q96LB9 341 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 PELOQ9BRX2 385 aaKnown RBP24.01■■□□□ 1.43
HLA-C-208ENST00000487245 OR51V1Q9H2C8 321 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 PLCL2Q9UPR0 1127 aa24.01■■□□□ 1.43
HLA-C-208ENST00000487245 IGKV1D-16P01601 117 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 NOS3P29474 1203 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 E2F1Q01094 437 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 ZC3H14Q6PJT7 736 aaKnown RBP24■■□□□ 1.43
HLA-C-208ENST00000487245 GLCCI1Q86VQ1 547 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 OR4M1Q8NGD0 313 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 ZFAND1Q8TCF1 268 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 TRIM63Q969Q1 353 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 MAP3K3Q99759 626 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 MCCC2Q9HCC0 563 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 RPS6KB2Q9UBS0 482 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 NPFFR2Q9Y5X5 522 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 CLCA3PQ9Y6N3 262 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 TRAV27A0A087WT01 109 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 CCDC85CA6NKD9 419 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 NPIPB9F8W1W9 429 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 PPP1R3DO95685 299 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 C1QBP02746 253 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 GALNSP34059 522 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 RAB25P57735 213 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 RACK1P63244 317 aaKnown RBP24■■□□□ 1.43
HLA-C-208ENST00000487245 ZNF267Q14586 743 aaPredicted RBP24■■□□□ 1.43
HLA-C-208ENST00000487245 ALG10BQ5I7T1 473 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 ZNF57Q68EA5 555 aaPredicted RBP24■■□□□ 1.43
HLA-C-208ENST00000487245 ULK3Q6PHR2 472 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 PAMR1Q6UXH9 720 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 CEACAM19Q7Z692 300 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 YIPF7Q8N8F6 280 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 C4orf36Q96KX1 117 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 MFRPQ9BY79 579 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 RBCK1Q9BYM8 510 aa24■■□□□ 1.43
HLA-C-208ENST00000487245 TMEM131Q92545 1883 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 IGHV1OR15-9A0A0B4J2B8 117 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 EFCAB7A8K855 629 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 TGFBR3LH3BV60 316 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 ZNF749O43361 778 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 CD1AP06126 327 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 EIF4EP06730 217 aaKnown RBP23.99■■□□□ 1.43
HLA-C-208ENST00000487245 SLC6A1P30531 599 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 GZMKP49863 264 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 RRAS2P62070 204 aaPredicted RBP23.99■■□□□ 1.43
HLA-C-208ENST00000487245 OR51A7Q8NH64 312 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 RFT1Q96AA3 541 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 GON7Q9BXV9 100 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 ST6GALNAC2Q9UJ37 374 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 RASD1Q9Y272 281 aa23.99■■□□□ 1.43
HLA-C-208ENST00000487245 TRAV1-2A0A0B4J238 106 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 INMT-MINDY4F8WBC2 141 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 OGG1O15527 345 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 SRFP11831 508 aa23.98■■□□□ 1.43
HLA-C-208ENST00000487245 NME1P15531 152 aaKnown RBP23.98■■□□□ 1.43
HLA-C-208ENST00000487245 ARSBP15848 533 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms