RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 PCBP3P57721 371 aaKnown RBP12.24□□□□□ -0.45
HMGN1-216ENST00000486741 OR8S1Q8NH09 359 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 DYNC2LI1Q8TCX1 351 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 TNFAIP8L1Q8WVP5 186 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 RASD2Q96D21 266 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 ORAI3Q9BRQ5 295 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 LRRC61Q9BV99 259 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 POU2F3Q9UKI9 436 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 DIMT1Q9UNQ2 313 aaKnown RBP12.24□□□□□ -0.45
HMGN1-216ENST00000486741 ASXL3Q9C0F0 2248 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 IGKV1-8A0A0C4DH67 115 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 M0R082 166 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 FCARP24071 287 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 TACR3P29371 465 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 GDI2P50395 445 aaKnown RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 SNRPGP62308 76 aaKnown RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 BTBD16Q32M84 506 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 EID2Q8N6I1 236 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 TRMT10AQ8TBZ6 339 aaKnown RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 RBP7Q96R05 134 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 LYRM4Q9HD34 91 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 DUSP22Q9NRW4 184 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 EPHA6Q9UF33 1036 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 ANKRD36A6QL64 1941 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 CLUP10909 449 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 RPS27P42677 84 aaKnown RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 TOR1AIP2Q8NFQ8 470 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 OR8H1Q8NGG4 311 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 C16orf52Q8NHV5 167 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 TMEM234Q8WY98 164 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF566Q969W8 418 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 CMKLR1Q99788 373 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 C12orf4Q9NQ89 552 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF224Q9NZL3 707 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 LRRTM2O43300 516 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 OR8G3PP0DMU2 310 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 MAKP20794 623 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 HNRNPFP52597 415 aaKnown RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 CLDN12P56749 244 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 GALK2Q01415 458 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 ARHGAP11BQ3KRB8 267 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 SFRP4Q6FHJ7 346 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 CCDC71Q8IV32 467 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 OR2T4Q8NH00 348 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 APH1BQ8WW43 257 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 Q96M85 177 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 NUFIP1Q9UHK0 495 aaKnown RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 ACOD1A6NK06 481 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF264O43296 627 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 GCM2O75603 506 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 MAPK14Q16539 360 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 LYSMD4Q5XG99 296 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 SLC35D2Q76EJ3 337 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 SYT9Q86SS6 491 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 NANOGP1Q8N7R0 232 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 LSM14AQ8ND56 463 aaKnown RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.23□□□□□ -0.45
HMGN1-216ENST00000486741 YIPF6Q96EC8 236 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 GINS4Q9BRT9 223 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 PLCXD1Q9NUJ7 323 aa12.23□□□□□ -0.45
HMGN1-216ENST00000486741 TMEM72A0PK05 275 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TLCD2A6NGC4 264 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF749O43361 778 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 PRKXP51817 358 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 HSD11B2P80365 405 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF620Q6ZNG0 422 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 Q6ZNX1 250 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 GALNTL5Q7Z4T8 443 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 LRRC56Q8IYG6 542 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-216ENST00000486741 FAM26EQ8N5C1 309 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 MS4A15Q8N5U1 240 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TMEM99Q8N816 258 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 LRRC20Q8TCA0 184 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 ADAMTS18Q8TE60 1221 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 WFDC6Q9BQY6 131 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 NUDT22Q9BRQ3 303 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 FUZQ9BT04 418 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TRPV4Q9HBA0 871 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 SIT1Q9Y3P8 196 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 CDHR4A6H8M9 788 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TLX3O43711 291 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TOXO94900 526 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 HSD11B1P28845 292 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 AFF3P51826 1226 aaKnown RBP12.22□□□□□ -0.45
HMGN1-216ENST00000486741 MVDP53602 400 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 PITPNAQ00169 270 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 FZD2Q14332 565 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 C3orf38Q5JPI3 329 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 SLC16A12Q6ZSM3 486 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 MAMDC2Q7Z304 686 aaPredicted RBP12.22□□□□□ -0.45
HMGN1-216ENST00000486741 MARCH3Q86UD3 253 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 TIGD4Q8IY51 512 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF440Q8IYI8 595 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF101Q8IZC7 436 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 CELF2-AS1Q8N7Q2 184 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 CHPT1Q8WUD6 406 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 GHSRQ92847 366 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 OPALINQ96PE5 141 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 OR1F2PQ96R84 312 aa12.22□□□□□ -0.45
HMGN1-216ENST00000486741 NEK6Q9HC98 313 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms