RNA–Protein interactions for RNA: ENST00000486549.5

USP4-212, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 5

Gene USP4, Length 749 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-212ENST00000486549 TPST1O60507 370 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 SERPINB7O75635 380 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 TNFSF13O75888 250 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 SMNDC1O75940 238 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP4-212ENST00000486549 PCGF2P35227 344 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 HTR3AP46098 478 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 CPA2P48052 419 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 DLX5P56178 289 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 DMTNQ08495 405 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 SNTB1Q13884 538 aaKnown RBP13.21□□□□□ -0.29
USP4-212ENST00000486549 ZNF239Q16600 458 aaKnown RBP13.21□□□□□ -0.29
USP4-212ENST00000486549 GLIPR1L2Q4G1C9 344 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 WBP2NLQ6ICG8 309 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 DHRS4L2Q6PKH6 230 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 COMTD1Q86VU5 262 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 ADGRG3Q86Y34 549 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 SMYD1Q8NB12 490 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 CPNE4Q96A23 557 aaPredicted RBP13.21□□□□□ -0.29
USP4-212ENST00000486549 LRRC46Q96FV0 321 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 RSPO3Q9BXY4 272 aaPredicted RBP13.21□□□□□ -0.29
USP4-212ENST00000486549 SLC13A4Q9UKG4 626 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 PACSIN3Q9UKS6 424 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 USP22Q9UPT9 525 aa13.21□□□□□ -0.29
USP4-212ENST00000486549 ADGRG4Q8IZF6 3080 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 CCT8L1PA6NM43 557 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 SULT2B1O00204 365 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 CRHP06850 196 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 CXCR1P25024 350 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 CPOXP36551 454 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 KIR2DL2P43627 348 aaPredicted RBP13.2□□□□□ -0.3
USP4-212ENST00000486549 NUDT2P50583 147 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 GZMMP51124 257 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 PCBP3P57721 371 aaKnown RBP13.2□□□□□ -0.3
USP4-212ENST00000486549 VMACQ2NL98 169 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 FCRLAQ7L513 359 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 SLC30A8Q8IWU4 369 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 ABHD3Q8WU67 409 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 C14orf79Q96F83 325 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 ARL5BQ96KC2 179 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 ENKD1Q9H0I2 346 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 PIGMQ9H3S5 423 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 ARL2BPQ9Y2Y0 163 aa13.2□□□□□ -0.3
USP4-212ENST00000486549 MPDZO75970 2070 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 M0QX08 132 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 GCM2O75603 506 aaPredicted RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 MFN2O95140 757 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 FESP07332 822 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 PRF1P14222 555 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 KLK2P20151 261 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 ENPP1P22413 925 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 DIO1P49895 249 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 CTBP2P56545 445 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 RGS8P57771 180 aaPredicted RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 RAC3P60763 192 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 NCALDP61601 193 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 BNIP2Q12982 314 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 MYBPHQ13203 477 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 INTS11Q5TA45 600 aaKnown RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 EEF1A1P5Q5VTE0 462 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 TMPPEQ6ZT21 453 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 BTLAQ7Z6A9 289 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 PIGWQ7Z7B1 504 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 CALHM3Q86XJ0 350 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 LURAP1LQ8IV03 231 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 SLC26A7Q8TE54 656 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 RNF128Q8TEB7 428 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 RNASE6Q93091 150 aaKnown RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 DDIT4LQ96D03 193 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 STARD4Q96DR4 205 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 CMTM5Q96DZ9 223 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 GMPPAQ96IJ6 420 aaPredicted RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 RBM24Q9BX46 236 aaKnown RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 ADAM19Q9H013 955 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 OPN3Q9H1Y3 402 aaPredicted RBP13.19□□□□□ -0.3
USP4-212ENST00000486549 EFCAB1Q9HAE3 211 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 KLHL28Q9NXS3 571 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 JKAMPQ9P055 326 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 RPS6KB2Q9UBS0 482 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 PROCRQ9UNN8 238 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 EMC9Q9Y3B6 208 aa13.19□□□□□ -0.3
USP4-212ENST00000486549 ZC3H12DA2A288 527 aaKnown RBP13.18□□□□□ -0.3
USP4-212ENST00000486549 FAM220BPB1ANY3 271 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 SYT5O00445 386 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 SMAD9O15198 467 aaKnown RBP13.18□□□□□ -0.3
USP4-212ENST00000486549 SS18L1O75177 396 aaPredicted RBP13.18□□□□□ -0.3
USP4-212ENST00000486549 IGFBP2P18065 325 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 HTR2AP28223 471 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 PEX19P40855 299 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 OR2B6P58173 313 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 CSNK2A1P68400 391 aaPredicted RBP13.18□□□□□ -0.3
USP4-212ENST00000486549 GUSBP1Q15486 140 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 GTF2IRD2BQ6EKJ0 949 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 ERICH5Q6P6B1 374 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 FAM214BQ7L5A3 538 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 ARPINQ7Z6K5 226 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 GTF2IRD2Q86UP8 949 aa13.18□□□□□ -0.3
USP4-212ENST00000486549 DMRTC2Q8IXT2 367 aaPredicted RBP13.18□□□□□ -0.3
USP4-212ENST00000486549 BHLHE22Q8NFJ8 381 aaPredicted RBP13.18□□□□□ -0.3
USP4-212ENST00000486549 OR52E4Q8NGH9 312 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms