RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 VRK2Q86Y07 508 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 CADM2Q8N3J6 435 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 BBS10Q8TAM1 723 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 DDIT4LQ96D03 193 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 OR11A1Q9GZK7 315 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 ACTR6Q9GZN1 396 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 LIME1Q9H400 295 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 A4GALTQ9NPC4 353 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 CCM2LQ9NUG4 571 aaPredicted RBP11.48□□□□□ -0.57
CHMP3-208ENST00000486404 TMEM45AQ9NWC5 275 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 DCTN4Q9UJW0 460 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 HDGFL3Q9Y3E1 203 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 DSPPQ9NZW4 1301 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 FREM1Q5H8C1 2179 aa11.48□□□□□ -0.57
CHMP3-208ENST00000486404 TMED7-TICAM2A0A0A6YYA0 188 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 A0A0G2JND7 137 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 A0A0G2JPF8 293 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 CDHR4A6H8M9 788 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 HNRNPCL2B2RXH8 293 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 HNRNPCL3B7ZW38 293 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 FAAHO00519 579 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 ANGPT2O15123 496 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 CYTIPO60759 359 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 HNRNPCL1O60812 293 aaKnown RBP11.47□□□□□ -0.57
CHMP3-208ENST00000486404 SASH3O75995 380 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 PMS2P2O95744 297 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 THBS1P07996 1170 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 TFPTP0C1Z6 253 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 HNRNPCL4P0DMR1 293 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 CRYGSP22914 178 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 TACR3P29371 465 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 SLC1A3P43003 542 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 OR2B6P58173 313 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 PLAURQ03405 335 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 ALKBH2Q6NS38 261 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 STAC2Q6ZMT1 411 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 NUFIP2Q7Z417 695 aaKnown RBP11.47□□□□□ -0.57
CHMP3-208ENST00000486404 CXorf67Q86X51 503 aaPredicted RBP11.47□□□□□ -0.57
CHMP3-208ENST00000486404 WFDC8Q8IUA0 241 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF100Q8IYN0 542 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 STEAP2Q8NFT2 490 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 PIGXQ8TBF5 258 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 MAL2Q969L2 176 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 DNAJA3Q96EY1 480 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 PSD2Q9BQI7 771 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 BCO1Q9HAY6 547 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF232Q9UNY5 417 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 IFT52Q9Y366 437 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 TMED7Q9Y3B3 224 aa11.47□□□□□ -0.57
CHMP3-208ENST00000486404 EVPLLA8MZ36 301 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 DNPH1O43598 174 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 EDF1O60869 148 aaKnown RBP11.46□□□□□ -0.57
CHMP3-208ENST00000486404 ADAM11O75078 769 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 NUDT7P0C024 238 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 GKN3PP0CG01 181 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 TROVE2P10155 538 aaKnown RBP eCLIP11.46□□□□□ -0.57
CHMP3-208ENST00000486404 CXCR1P25024 350 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 CLK1P49759 484 aaKnown RBP11.46□□□□□ -0.57
CHMP3-208ENST00000486404 MAPK11Q15759 364 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 HSP90B2PQ58FF3 399 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF311Q5JNZ3 666 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 LRIF1Q5T3J3 769 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 PRAMEF8Q5VWM4 474 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 PRAMEF7Q5VXH5 474 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 ABLIM2Q6H8Q1 611 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 WBP2NLQ6ICG8 309 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 SPNS3Q6ZMD2 512 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 GALNT5Q7Z7M9 940 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 KRT73Q86Y46 540 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 FUNDC1Q8IVP5 155 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 STON2Q8WXE9 905 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 KISS1RQ969F8 398 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-208ENST00000486404 ZNF300Q96RE9 604 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-208ENST00000486404 FOXC2Q99958 501 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 SPATA9Q9BWV2 254 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 UBTD1Q9HAC8 227 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 RLIMQ9NVW2 624 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 SLC25A37Q9NYZ2 338 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 LEF1Q9UJU2 399 aaPredicted RBP11.46□□□□□ -0.57
CHMP3-208ENST00000486404 OSGIN1Q9UJX0 560 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 GPR52Q9Y2T5 361 aa11.46□□□□□ -0.57
CHMP3-208ENST00000486404 TEP1Q99973 2627 aaKnown RBP11.46□□□□□ -0.58
CHMP3-208ENST00000486404 A0A1W2PP18 115 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 TMEM72A0PK05 275 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 ZNF724A8MTY0 619 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 DEFB108AA8MXU0 73 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 ZNF208O43345 1280 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 ATE1O95260 518 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 HOXB9P17482 250 aaPredicted RBP11.45□□□□□ -0.58
CHMP3-208ENST00000486404 KLK2P20151 261 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 PSMB1P20618 241 aaKnown RBP11.45□□□□□ -0.58
CHMP3-208ENST00000486404 IDUAP35475 653 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 OR3A2P47893 321 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 MAP2K6P52564 334 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 NCALDP61601 193 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 SLC35A1P78382 337 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 TESK1Q15569 626 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 BEX5Q5H9J7 111 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 PAGE3Q5JUK9 113 aa11.45□□□□□ -0.58
CHMP3-208ENST00000486404 DHDDSQ86SQ9 333 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms