RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 A0A1W2PNV4 684 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 EEF1E1-BLOC1S5C9J1V9 151 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 EEF1E1O43324 174 aaKnown RBP18.36■□□□□ 0.53
VARS-224ENST00000479051 ZNF208O43345 1280 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 IFNA14P01570 189 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 PRG2P13727 222 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 CCNA2P20248 432 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 RGS8P57771 180 aaPredicted RBP18.36■□□□□ 0.53
VARS-224ENST00000479051 RAC3P60763 192 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 DMTNQ08495 405 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 CACNA1CQ13936 2221 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 ZNF239Q16600 458 aaKnown RBP18.36■□□□□ 0.53
VARS-224ENST00000479051 ADGRG3Q86Y34 549 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 CNEP1R1Q8N9A8 125 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 CCDC197Q8NCU1 140 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 ZHX1-C8orf76Q96EF9 292 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 ZNF583Q96ND8 569 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 ADAM19Q9H013 955 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 COQ10BQ9H8M1 238 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 TESQ9UGI8 421 aaKnown RBP18.36■□□□□ 0.53
VARS-224ENST00000479051 HDGFL3Q9Y3E1 203 aa18.36■□□□□ 0.53
VARS-224ENST00000479051 A0A1W2PNR3 127 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 ELOVL7A1L3X0 281 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 SULT2B1O00204 365 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 SYT5O00445 386 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 FRS3O43559 492 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 TPST1O60507 370 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 AQP8O94778 261 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 OPN1SWP03999 348 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 C8BP07358 591 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 COX6B1P14854 86 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 COL8A1P27658 744 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 GRNP28799 593 aaKnown RBP18.35■□□□□ 0.53
VARS-224ENST00000479051 SLC7A2P52569 658 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 AGFG1P52594 562 aaKnown RBP18.35■□□□□ 0.53
VARS-224ENST00000479051 CTBP2P56545 445 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 FOXF2Q12947 444 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 RNPS1Q15287 305 aaKnown RBP18.35■□□□□ 0.53
VARS-224ENST00000479051 TMPPEQ6ZT21 453 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 CCDC80Q76M96 950 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 RANBP3LQ86VV4 465 aaPredicted RBP18.35■□□□□ 0.53
VARS-224ENST00000479051 SLC15A3Q8IY34 581 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 MICU2Q8IYU8 434 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 SMYD1Q8NB12 490 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 RELL2Q8NC24 303 aaPredicted RBP18.35■□□□□ 0.53
VARS-224ENST00000479051 OR52E4Q8NGH9 312 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 GMPPAQ96IJ6 420 aaPredicted RBP18.35■□□□□ 0.53
VARS-224ENST00000479051 ZNF559Q9BR84 538 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 TRIM2Q9C040 744 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 CMTM6Q9NX76 183 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 SELENONQ9NZV5 590 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 PACSIN3Q9UKS6 424 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 EMC9Q9Y3B6 208 aa18.35■□□□□ 0.53
VARS-224ENST00000479051 FLNBO75369 2602 aaKnown RBP18.35■□□□□ 0.53
VARS-224ENST00000479051 CCT8L1PA6NM43 557 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 ENPP1P22413 925 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 DIO1P49895 249 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 GLIPR1L2Q4G1C9 344 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 FCRLAQ7L513 359 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 SLC43A2Q8N370 569 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 SRXN1Q9BYN0 137 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 TMEM27Q9HBJ8 222 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 TAGLN3Q9UI15 199 aa18.34■□□□□ 0.53
VARS-224ENST00000479051 FOXD3Q9UJU5 478 aaPredicted RBP18.34■□□□□ 0.53
VARS-224ENST00000479051 UTP20O75691 2785 aaKnown RBP18.34■□□□□ 0.53
VARS-224ENST00000479051 TMEM72A0PK05 275 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 DNPH1O43598 174 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 GCM2O75603 506 aaPredicted RBP18.33■□□□□ 0.52
VARS-224ENST00000479051 PMS2P2O95744 297 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 PEX19P40855 299 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 CPA2P48052 419 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 KCNJ5P48544 419 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 PSME3P61289 254 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 SIRPAP78324 504 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 HOXC5Q00444 222 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 LIPEQ05469 1076 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 TFF3Q07654 80 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 MYBPHQ13203 477 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 FAM91A1Q658Y4 838 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 C8orf82Q6P1X6 216 aaPredicted RBP18.33■□□□□ 0.52
VARS-224ENST00000479051 FAM214BQ7L5A3 538 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 MED12LQ86YW9 2145 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 RNF128Q8TEB7 428 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 DNAJA4Q8WW22 397 aaPredicted RBP18.33■□□□□ 0.52
VARS-224ENST00000479051 ROBO4Q8WZ75 1007 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 PROX1Q92786 737 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 TAMM41Q96BW9 452 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 TACO1Q9BSH4 297 aaKnown RBP18.33■□□□□ 0.52
VARS-224ENST00000479051 SPAG4Q9NPE6 437 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 TMEM181Q9P2C4 612 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 BAG5Q9UL15 447 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 SLC9A8Q9Y2E8 581 aa18.33■□□□□ 0.52
VARS-224ENST00000479051 ELOA3DA6NLF2 546 aaPredicted RBP18.32■□□□□ 0.52
VARS-224ENST00000479051 C19orf84I3L1E1 186 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 GSTA4O15217 222 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 HNRNPRO43390 633 aaKnown RBP18.32■□□□□ 0.52
VARS-224ENST00000479051 TNFSF13O75888 250 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 LGI1O95970 557 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 MNAT1P51948 309 aa18.32■□□□□ 0.52
VARS-224ENST00000479051 DUSP7Q16829 419 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms