RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PATL1Q86TB9 770 aaKnown RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 CALHM3Q86XJ0 350 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 FITM2Q8N6M3 262 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ANKS4BQ8N8V4 417 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 CNEP1R1Q8N9A8 125 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 MBD3L2Q8NHZ7 208 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 RNF217Q8TC41 542 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 BCAS4Q8TDM0 211 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 WNT2BQ93097 391 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ADGRG7Q96K78 797 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF583Q96ND8 569 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 TM9SF2Q99805 663 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 GPATCH1Q9BRR8 931 aaKnown RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 RSPO3Q9BXY4 272 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 SRXN1Q9BYN0 137 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 OR11A1Q9GZK7 315 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 SERINC1Q9NRX5 453 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 KLHL28Q9NXS3 571 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 ADA2Q9NZK5 511 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 RPS6KB2Q9UBS0 482 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 CHRNA9Q9UGM1 479 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 TAGLN3Q9UI15 199 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 MCTS1Q9ULC4 181 aaKnown RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 TMED7Q9Y3B3 224 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 SPIN1Q9Y657 262 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-215ENST00000478531 CSMD2Q7Z408 3487 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 POLQO75417 2590 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 FBN2P35556 2912 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 FREM1Q5H8C1 2179 aa6.19□□□□□ -1.42
BRCA1-215ENST00000478531 TMEM72A0PK05 275 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 M0QX08 132 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ADAMDEC1O15204 470 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 GSTA4O15217 222 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 GCM2O75603 506 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 AQP8O94778 261 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 MFN2O95140 757 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 PLGP00747 810 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 FCGR2AP12318 317 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 CXCR1P25024 350 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 CEACAM8P31997 349 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 APOBEC1P41238 236 aaKnown RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ACAA2P42765 397 aaKnown RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 HTR3AP46098 478 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 CARD18P57730 90 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 PSME3P61289 254 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 SIRPAP78324 504 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 LIPEQ05469 1076 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 FOXF2Q12947 444 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 BNIP2Q12982 314 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 DUSP7Q16829 419 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ZSWIM7Q19AV6 140 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 C4orf46Q504U0 113 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 WBP2NLQ6ICG8 309 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ERICH5Q6P6B1 374 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 HACD2Q6Y1H2 254 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 LIX1LQ8IVB5 337 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 SLC15A3Q8IY34 581 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 MICU2Q8IYU8 434 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 RNF148Q8N7C7 305 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 BHLHE22Q8NFJ8 381 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 VANGL1Q8TAA9 524 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 SLC25A43Q8WUT9 341 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 OSTF1Q92882 214 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 TAMM41Q96BW9 452 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 HOPXQ9BPY8 73 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 KCTD14Q9BQ13 255 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 PRR14Q9BWN1 585 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ALG2Q9H553 416 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 COQ10BQ9H8M1 238 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 KCNJ16Q9NPI9 418 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 TIGARQ9NQ88 270 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 OSGIN1Q9UJX0 560 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 PACSIN3Q9UKS6 424 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 CLEC4AQ9UMR7 237 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ANKRD17O75179 2603 aaKnown RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ELOVL7A1L3X0 281 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 FAAHO00519 579 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 RCBTB2O95199 551 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 PTNP21246 168 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 CTSSP25774 331 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 HTR2AP28223 471 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 DIO1P49895 249 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 CRYBA2P53672 197 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 SLC25A3Q00325 362 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 MYBPHQ13203 477 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ZNF239Q16600 458 aaKnown RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 RANBP3LQ86VV4 465 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ADGRG3Q86Y34 549 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 MCEMP1Q8IX19 187 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 RELL2Q8NC24 303 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 GPR32P1Q8NGA4 272 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 OR52E4Q8NGH9 312 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 LILRB4Q8NHJ6 448 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ROBO4Q8WZ75 1007 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 CPNE4Q96A23 557 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-215ENST00000478531 C3orf49Q96BT1 292 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 DDIT4LQ96D03 193 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 TPD52L3Q96J77 140 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 ARL5BQ96KC2 179 aa6.18□□□□□ -1.42
BRCA1-215ENST00000478531 UCN2Q96RP3 112 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms