RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 UPRTQ96BW1 309 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 HIST1H4GQ99525 98 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 BCAP29Q9UHQ4 241 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 HEBP2Q9Y5Z4 205 aa0.86□□□□□ -2.27
HPS3-205ENST00000478525 A0A1B0GW55 424 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 A6NIZ1 184 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 OR6C65A6NJZ3 312 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 KIF2AO00139 706 aaPredicted RBP0.85□□□□□ -2.27
HPS3-205ENST00000478525 ADCY5O95622 1261 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 CXCL14O95715 111 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DUX4L2P0CJ85 424 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DUX4L3P0CJ86 424 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DUX4L5P0CJ88 424 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DUX4L6P0CJ89 424 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DUX4L7P0CJ90 424 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 RBMY1CP0DJD4 496 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 ANXA3P12429 323 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 ATP6V1B2P21281 511 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 RAP1BP61224 184 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 RFX4Q33E94 735 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DUX4L9Q6RFH8 374 aaPredicted RBP0.85□□□□□ -2.27
HPS3-205ENST00000478525 SASS6Q6UVJ0 657 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 TMIGD1Q6UXZ0 262 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DLEU7Q6UYE1 221 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 VMP1Q96GC9 406 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 CRNKL1Q9BZJ0 848 aaKnown RBP0.85□□□□□ -2.27
HPS3-205ENST00000478525 NACA2Q9H009 215 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 TRPV5Q9NQA5 729 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 ZNF355PQ9NSJ1 428 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 C1orf123Q9NWV4 160 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 DUX4Q9UBX2 424 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 WARS2Q9UGM6 360 aaKnown RBP0.85□□□□□ -2.27
HPS3-205ENST00000478525 CYTH4Q9UIA0 394 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 S4R3C0 116 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 V9GY05 133 aa0.85□□□□□ -2.27
HPS3-205ENST00000478525 A0A1W2PP18 115 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 E9PMD0 336 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 SGK494L7N484 410 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 PSMA7O14818 248 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 RBFOX2O43251 390 aaKnown RBP eCLIP0.84□□□□□ -2.27
HPS3-205ENST00000478525 HBQ1P09105 142 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 GSTT2P0CG29 244 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 GSTT2BP0CG30 244 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 PTPN6P29350 595 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 SLC26A3P40879 764 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 DLX1P56177 255 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 PPP1R8Q12972 351 aaKnown RBP0.84□□□□□ -2.27
HPS3-205ENST00000478525 RCN2Q14257 317 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 ARL6IP1Q15041 203 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 C11orf71Q6IPW1 123 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 TMEM270Q6UE05 265 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 LYPD2Q6UXB3 125 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 OR8H3Q8N146 312 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 OR56B4Q8NH76 319 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 OR2A5Q96R48 311 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 SIRPDQ9H106 197 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 DNTTIP1Q9H147 329 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 CLMPQ9H6B4 373 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 VCPKMTQ9H867 229 aa0.84□□□□□ -2.27
HPS3-205ENST00000478525 FAM74A7A6NL05 159 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 H0Y626 953 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 JAK2O60674 1132 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 GNA14O95837 355 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 ZCCHC18P0CG32 403 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 VDAC2P45880 294 aaPredicted RBP0.83□□□□□ -2.28
HPS3-205ENST00000478525 MYBPC1Q00872 1141 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 TSTA3Q13630 321 aaPredicted RBP0.83□□□□□ -2.28
HPS3-205ENST00000478525 SLMAPQ14BN4 828 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 CARTPTQ16568 116 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 FAM74A3Q4VXF1 159 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 ZNF684Q5T5D7 378 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 LANCL3Q6ZV70 420 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 ZNF410Q86VK4 478 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 SVOPLQ8N434 492 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 OR10G3Q8NGC4 313 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 CNIH3Q8TBE1 160 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 MCOLN3Q8TDD5 553 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 TVP23CQ96ET8 276 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 DTD2Q96FN9 168 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 LZTS2Q9BRK4 669 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 SELENOIQ9C0D9 397 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 C20orf85Q9H1P6 137 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 COPS7BQ9H9Q2 264 aaPredicted RBP0.83□□□□□ -2.28
HPS3-205ENST00000478525 HOMER3Q9NSC5 361 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 SEC16AO15027 2179 aa0.83□□□□□ -2.28
HPS3-205ENST00000478525 KMT2BQ9UMN6 2715 aaPredicted RBP0.82□□□□□ -2.28
HPS3-205ENST00000478525 PLAC8L1A1L4L8 177 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 ZNF320A2RRD8 509 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 GLAP06280 429 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 CD80P33681 288 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 REG3AQ06141 175 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 CUL1Q13616 776 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 GALNTL5Q7Z4T8 443 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 ZDHHC21Q8IVQ6 265 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 STKLD1Q8NE28 680 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 CCDC54Q8NEL0 328 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 OR10G9Q8NGN4 311 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 PDXPQ96GD0 296 aa0.82□□□□□ -2.28
HPS3-205ENST00000478525 WRAP53Q9BUR4 548 aaKnown RBP0.82□□□□□ -2.28
HPS3-205ENST00000478525 TEKT3Q9BXF9 490 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms