RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 ZNF830Q96NB3 372 aaPredicted RBP3.86□□□□□ -1.79
VPS50-214ENST00000477935 USP28Q96RU2 1077 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 ATOH8Q96SQ7 321 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 C11orf70Q9BRQ4 267 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 SYT11Q9BT88 431 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 HES7Q9BYE0 225 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 TRIM7Q9C029 511 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 WWP1Q9H0M0 922 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 ATG10Q9H0Y0 220 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 ASB8Q9H765 288 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 KCNK13Q9HB14 408 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 MYNNQ9NPC7 610 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 ACP6Q9NPH0 428 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 SAMSN1Q9NSI8 373 aaKnown RBP3.86□□□□□ -1.79
VPS50-214ENST00000477935 PNPLA3Q9NST1 481 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 C14orf105Q9NVL8 296 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 HAO2Q9NYQ3 351 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 C19orf25Q9UFG5 118 aaPredicted RBP3.86□□□□□ -1.79
VPS50-214ENST00000477935 STUB1Q9UNE7 303 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 FAM215AQ9Y5M1 114 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 CCDC88CQ9P219 2028 aa3.86□□□□□ -1.79
VPS50-214ENST00000477935 IGLV7-46A0A075B6I9 117 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 A0A0J9YY10 115 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 A0A1W2PPM1 405 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 A0A1W2PPR1 153 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 C2orf81A6NN90 581 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 GABRR3A8MPY1 467 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 ZNF195O14628 629 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 HCRTR1O43613 425 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 TCF21O43680 179 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 PRPSAP2O60256 369 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 LSM8O95777 96 aaKnown RBP3.85□□□□□ -1.79
VPS50-214ENST00000477935 IGHV2-70P01814 119 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 ABCB1P08183 1280 aaPredicted RBP3.85□□□□□ -1.79
VPS50-214ENST00000477935 LINGO3P0C6S8 592 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 DESP17661 470 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 MPZP25189 248 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 SHMT2P34897 504 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 CYLC1P35663 651 aaPredicted RBP3.85□□□□□ -1.79
VPS50-214ENST00000477935 KRT20P35900 424 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 RBMXP38159 391 aaKnown RBP3.85□□□□□ -1.79
VPS50-214ENST00000477935 CD151P48509 253 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 HCAR3P49019 387 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 ZNF75DP51815 510 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 LRRC63Q05C16 580 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 VEZF1Q14119 521 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 NFE2L1Q14494 772 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 ZIC1Q15915 447 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 DEFB110Q30KQ9 67 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 UGT3A2Q3SY77 523 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 LDLRAP1Q5SW96 308 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 C6orf52Q5T4I8 152 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 C1orf185Q5T7R7 199 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 WLSQ5T9L3 541 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 C6orf163Q5TEZ5 329 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 MFSD4BQ5TF39 518 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 RTL6Q6ICC9 239 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 SCYL2Q6P3W7 929 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 ZNF613Q6PF04 617 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 TMEM220Q6QAJ8 160 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 HOGA1Q86XE5 327 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 CRLF3Q8IUI8 442 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 OR8H2Q8N162 312 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 PYROXD2Q8N2H3 581 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 KCTD6Q8NC69 237 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 TSPAN14Q8NG11 270 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 OR10G8Q8NGN5 311 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 OR2L2Q8NH16 312 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 GDAP1Q8TB36 358 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 FAM172AQ8WUF8 416 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 NTNG2Q96CW9 530 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 CSPG4P5Q96PW8 444 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 VGLL1Q99990 258 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 CCDC106Q9BWC9 280 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 POLR1EQ9GZS1 481 aaKnown RBP3.85□□□□□ -1.79
VPS50-214ENST00000477935 ANKZF1Q9H8Y5 726 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 OR6C2Q9NZP2 312 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 PAK5Q9P286 719 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 TMED3Q9Y3Q3 217 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 BIRC6Q9NR09 4857 aa3.85□□□□□ -1.79
VPS50-214ENST00000477935 PHF3Q92576 2039 aaKnown RBP3.85□□□□□ -1.79
VPS50-214ENST00000477935 DYSFO75923 2080 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 EEF2KO00418 725 aaKnown RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 GLRA3O75311 464 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 MTX2O75431 263 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 YEATS4O95619 227 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 DUS4LO95620 317 aaKnown RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 IGHG3P01860 377 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 C8orf89P0DMQ9 161 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 KRT3P12035 628 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 UGT2B7P16662 529 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 HNF1AP20823 631 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 OPRM1P35372 400 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 HLCSP50747 726 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 MAPK12P53778 367 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 MAXP61244 160 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 MFSD12Q6NUT3 480 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 FIP1L1Q6UN15 594 aaKnown RBP3.84□□□□□ -1.79
VPS50-214ENST00000477935 NUP54Q7Z3B4 507 aa3.84□□□□□ -1.79
VPS50-214ENST00000477935 CPEB2Q7Z5Q1 589 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms