RNA–Protein interactions for RNA: ENST00000477676.6

CKS1B-207, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-207ENST00000477676 TMEM158Q8WZ71 300 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 TRIM63Q969Q1 353 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF524Q96C55 264 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 KLHL29Q96CT2 875 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 ZBED6CLQ96FA7 236 aaPredicted RBP4.05□□□□□ -1.76
CKS1B-207ENST00000477676 FRG2BQ96QU4 278 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 SERPINI1Q99574 410 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 SLC39A3Q9BRY0 314 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 CENPKQ9BS16 269 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 LRRC1Q9BTT6 524 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 NTMT1Q9BV86 223 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 ACTR6Q9GZN1 396 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 CXorf56Q9H5V9 222 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 WDR41Q9HAD4 459 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 NMRAL1Q9HBL8 299 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 YAE1D1Q9NRH1 226 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 NSMCE4AQ9NXX6 385 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 PCTPQ9UKL6 214 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 PROCRQ9UNN8 238 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 LIPT1Q9Y234 373 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 ACOT9Q9Y305 439 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF175Q9Y473 711 aa4.05□□□□□ -1.76
CKS1B-207ENST00000477676 IGLV3-32A0A0A0MS00 114 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GOLGA6L10A0A0M3HER8 536 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GXYLT2A0PJZ3 443 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 C1orf226A1L170 272 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 A8MV72 311 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SHISA9B4DS77 424 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 F5H697 171 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 EFNA2O43921 213 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CXCL13O43927 109 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GMFGO60234 142 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PLOD3O60568 738 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SS18L1O75177 396 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 JTBO76095 146 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PSMG1O95456 288 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 AMY1AP04745 511 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 IL3P08700 152 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 FAM157CP0CG43 387 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GFAPP14136 432 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PSMB1P20618 241 aaKnown RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CRABP2P29373 138 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 AGTR1P30556 359 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SPRP35270 261 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 IDUAP35475 653 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GCKP35557 465 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SLC6A9P48067 706 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 ALDH9A1P49189 494 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 HTR6P50406 440 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 MAPK12P53778 367 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PNLIPRP2P54317 469 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CDH13P55290 713 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 RPS4XP62701 263 aaKnown RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 IRX1P78414 480 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 EFR3AQ14156 821 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 RAB39AQ14964 217 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SLMAPQ14BN4 828 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 TAB1Q15750 504 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PGS1Q32NB8 556 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CHRFAM7AQ494W8 412 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF672Q499Z4 452 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 NCMAPQ5T1S8 102 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GRTP1Q5TC63 336 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 LGSNQ5TDP6 509 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 MORN5Q5VZ52 161 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 C11orf71Q6IPW1 123 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SCIMPQ6UWF3 145 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 ZDHHC24Q6UX98 284 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 RAPH1Q70E73 1250 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 NUFIP2Q7Z417 695 aaKnown RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GALNT10Q86SR1 603 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 MARCH3Q86UD3 253 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SLC44A2Q8IWA5 706 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CTAGE3PQ8IX95 158 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CMIPQ8IY22 773 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 GABRG1Q8N1C3 465 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 ZNF619Q8N2I2 560 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 C1orf52Q8N6N3 182 aaKnown RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 OR4F6Q8NGB9 312 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 OR6K3Q8NGY3 331 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 OR10D3Q8NH80 312 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 POC1BQ8TC44 478 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 TRPC4APQ8TEL6 797 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PYROXD1Q8WU10 500 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SMAP2Q8WU79 429 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 HTRA1Q92743 480 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 S100PBPQ96BU1 408 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 TMCO6Q96DC7 493 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PHF21BQ96EK2 531 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 C11orf24Q96F05 449 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 TRAF4Q9BUZ4 470 aaPredicted RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 C19orf24Q9BVV8 132 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 TRIM2Q9C040 744 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 DPH5Q9H2P9 285 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 NPAP1Q9NZP6 1156 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CPSF2Q9P2I0 782 aaKnown RBP4.04□□□□□ -1.76
CKS1B-207ENST00000477676 PRODH2Q9UF12 536 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 UTS2RQ9UKP6 389 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 SLC12A4Q9UP95 1085 aa4.04□□□□□ -1.76
CKS1B-207ENST00000477676 CFL2Q9Y281 166 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms